Os06g0641100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0641100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 179.61 | 0.63 | 3.63 | 3.99 | 0.258 | -3.45 | 0.865 | -2.75 | 0.612 | 0.911 | 5.698 | 5979 | -- | -- |
| 186.52 | 0.636 | 3.55 | 4.53 | 0.392 | -3.29 | 0.891 | -- | 0.688 | 0.644 | -3.257 | 5308 | -- | -- |
| 182.57 | 0.629 | 3.63 | 3.94 | 0.274 | -3.44 | -- | -2.77 | 0.598 | 1.85 | 9.598 | 5931 | -- | -- |
| 188.98 | 0.64 | 3.53 | 4.54 | 0.292 | -3.27 | -- | -- | 0.752 | 2.03 | 1.491 | 5806 | -- | -- |
| 186.8 | 0.637 | 3.62 | 3.96 | -- | -3.41 | -- | -2.71 | 0.612 | -- | 9.535 | 6017 | -- | -- |
| 366.26 | 0.897 | 3.69 | 2.99 | 0.19 | -- | 0.696 | -- | 0.0414 | 0.739 | -- | -- | -- | -- |
| 368.19 | 0.899 | 3.69 | 2.96 | 0.196 | -- | -- | -- | 0.0368 | 1.72 | -- | -- | -- | -- |
| 192.86 | 0.647 | 3.52 | 4.55 | -- | -3.24 | -- | -- | 0.776 | -- | 7.911 | 6039 | -- | -- |
| 564.97 | 1.11 | 3.72 | -- | 0.0878 | -1.23 | -- | -- | -0.122 | 14.4 | 20.9 | 291 | -- | -- |
| 370.54 | 0.899 | 3.69 | 2.97 | -- | -- | -- | -- | 0.0412 | -- | -- | -- | -- | -- |
| 599.79 | 1.15 | 3.76 | -- | 0.251 | -- | -- | -- | -0.293 | 2.07 | -- | -- | -- | -- |
| 565.28 | 1.11 | 3.72 | -- | -- | -1.18 | -- | -- | -0.124 | -- | 20.99 | 353 | -- | -- |
| 603.57 | 1.15 | 3.76 | -- | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.28 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 2 | 169.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 3 | 169.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 4 | 169.48 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 5 | 169.69 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 6 | 170.45 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 7 | 170.89 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 12 |
| 8 | 171.21 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 11 | 171.25 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 14 | 171.30 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 18 | 171.59 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 21 | 172.27 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 23 | 172.28 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 27 | 172.29 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 12 |
| 46 | 173.33 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 57 | 173.73 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 67 | 173.89 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 69 | 174.03 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 72 | 174.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 73 | 174.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 74 | 174.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 91 | 174.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 120 | 176.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 123 | 176.20 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 132 | 176.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 138 | 176.43 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 148 | 176.43 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 159 | 176.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 164 | 176.68 | radiation | 10.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 201 | 177.37 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 208 | 177.47 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 216 | 177.58 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 236 | 177.98 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 245 | 178.07 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 22 |
| 275 | 178.36 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 16 |
| 279 | 178.39 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 311 | 178.61 | radiation | 1.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 315 | 178.65 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 20 |
| 334 | 178.86 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 347 | 178.91 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 14 |
| 350 | 178.91 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 357 | 178.94 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 10 |
| 366 | 178.97 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 404 | 179.28 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 439 | 179.41 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 493 | 179.91 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 22 |
| 498 | 179.94 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 17 | 12 |
| 499 | 179.95 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 17 | 12 |
| 518 | 180.20 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 553 | 180.40 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 589 | 180.72 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 20 |
| 642 | 180.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 657 | 181.02 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 19 |
| 667 | 181.03 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 18 |
| 674 | 181.04 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 686 | 181.05 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 688 | 181.06 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 794 | 181.50 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 842 | 182.02 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 19 | NA |
| 889 | 182.43 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 890 | 182.43 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 954 | 182.58 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 16 | NA |