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Os06g0640800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.36 (0.0504) R2 : 0.612
β1 : 3.24 (0.19) R2dD : 0.283 R2D : 0.26
β2 : 3.15 (0.23) R2dC : 0.616 R2C : 0.168
β3 : -1.86 (0.297) R2dE : 0.128 R2E : -0.382
β4 : -3.66 (0.832) R2dD*C : 0.0576 R2D*C : -0.0241
β5 : 6.77 (1.4) R2dD*E : 0.0727 R2D*E : -0.0953
γ1 : -0.542 (0.108) R2dN8 : 0.03 R2N8 : 0.0627
σ : 0.935
deviance : 395.92
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C
peak time of C : 23.9
E
wheather : temperature
threshold : 13.63
memory length : 302
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.1
open length of G : 7.72

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
395.92 0.935 7.36 3.24 3.15 -1.86 -3.66 6.77 -0.542 23.9 13.63 302 18.1 7.72
413.68 0.947 7.39 2.98 3.08 -1.71 -0.428 -- -0.6 23.6 14.4 158 18.6 7.97
423.31 0.958 7.32 3.57 2.95 -1.86 -- 5.88 -0.449 23.5 18.2 215 18.4 7.6
414.06 0.948 7.4 2.98 3.07 -1.66 -- -- -0.599 23.7 14.4 139 18.7 8.08
480.98 1.02 7.53 2.6 -- 2.39 -- -0.83 -0.995 -- -2.125 357 14 15
453.37 0.998 7.4 2.88 2 -- -0.611 -- -0.708 23.7 -- -- -- --
454.98 0.999 7.4 2.9 2 -- -- -- -0.706 23.7 -- -- -- --
440.72 0.978 7.35 2.87 -- 1.79 -- -- -0.71 -- -269.2 283 14 15.2
650.19 1.19 7.46 -- 3.1 -1.44 -- -- -0.789 23.6 13.15 121 18.8 8.23
706.13 1.24 7.35 2.96 -- -- -- -- -0.682 -- -- -- -- --
676.81 1.22 7.47 -- 2.03 -- -- -- -1.03 23.8 -- -- -- --
650.57 1.19 7.44 -- -- 1.87 -- -- -1.1 -- -339.1 285 14 15.2
936.98 1.43 7.43 -- -- -- -- -- -1.01 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 397.94 temperature 15 270 > th dose dependent rect. 18 8
4 399.23 temperature 15 90 > th dose dependent rect. 20 7
11 401.96 temperature 20 90 > th dose independent rect. 20 7
31 405.09 temperature 10 90 > th dose dependent rect. 9 18
52 408.54 temperature 15 10 > th dose dependent rect. 22 6
66 409.34 temperature 20 10 > th dose independent rect. 22 5
84 410.64 temperature 20 30 > th dose independent rect. 9 18
100 411.49 humidity 50 30 > th dose dependent rect. 16 17
117 412.39 temperature 15 10 > th dose dependent rect. 18 10
139 413.96 temperature 25 720 < th dose dependent rect. 17 1
162 415.01 temperature 30 30 < th dose dependent rect. 15 16
187 415.83 temperature 30 90 < th dose dependent rect. 15 14
225 417.15 humidity 70 10 > th dose independent rect. 16 17
226 417.16 temperature 20 30 > th dose dependent rect. 4 5
228 417.23 humidity 50 43200 > th dose independent rect. 23 5
248 417.72 temperature 25 90 < th dose dependent rect. 16 7
255 417.99 humidity 50 43200 > th dose independent rect. 1 3
288 418.66 temperature 10 90 > th dose dependent rect. 11 16
291 418.69 humidity 50 90 > th dose dependent rect. 3 17
296 418.82 temperature 20 270 > th dose independent rect. 4 1
316 419.19 temperature 30 720 < th dose dependent rect. 11 9
317 419.27 humidity 70 30 > th dose independent rect. 3 6
329 419.47 temperature 10 43200 > th dose independent rect. 10 5
334 419.53 temperature 30 720 < th dose dependent rect. 14 5
337 419.58 radiation 30 30 < th dose independent rect. 3 6
340 419.62 atmosphere 1010 90 < th dose independent rect. 20 7
355 419.80 radiation 20 10 < th dose independent rect. 15 18
376 420.08 radiation 40 10 < th dose dependent rect. 14 19
389 420.29 humidity 90 90 < th dose independent rect. 9 19
398 420.46 temperature 30 30 < th dose independent rect. 15 18
400 420.46 radiation 30 90 < th dose dependent rect. 14 19
420 420.71 temperature 20 720 < th dose independent rect. 13 6
430 420.81 temperature 10 43200 > th dose independent rect. 10 8
436 420.92 temperature 20 720 < th dose independent rect. 11 9
451 421.12 wind 3 14400 < th dose independent rect. 14 1
452 421.12 wind 3 14400 > th dose independent rect. 4 15
453 421.13 temperature 20 90 > th dose independent rect. 11 16
467 421.23 temperature 20 720 < th dose dependent rect. 10 8
473 421.29 wind 3 14400 < th dose independent rect. 4 15
494 421.52 wind 3 14400 > th dose independent rect. 14 1
497 421.52 temperature 15 720 > th dose dependent rect. 16 5
500 421.53 wind 3 4320 < th dose dependent rect. 7 1
527 421.72 temperature 20 720 > th dose independent rect. 15 6
530 421.75 temperature 20 270 > th dose independent rect. 3 3
534 421.75 humidity 60 90 > th dose dependent rect. 3 6
560 421.97 atmosphere 1000 90 > th dose independent rect. 3 6
572 422.04 wind 3 14400 > th dose independent sin 1 NA
586 422.09 temperature 15 30 > th dose independent rect. 22 16
587 422.11 temperature 20 270 > th dose independent rect. 2 7
598 422.16 wind 3 14400 < th dose independent sin 0 NA
599 422.16 temperature 20 720 < th dose independent rect. 16 1
603 422.18 wind 9 14400 < th dose independent rect. 23 5
606 422.18 humidity 80 90 > th dose dependent rect. 3 21
610 422.21 wind 1 14400 < th dose independent rect. 15 12
614 422.22 wind 1 14400 < th dose independent sin 16 NA
616 422.22 wind 3 14400 < th dose dependent rect. 8 10
627 422.30 wind 1 14400 < th dose independent rect. 13 14
635 422.33 wind 1 14400 < th dose dependent rect. 9 19
653 422.39 humidity 50 14400 > th dose independent rect. 19 9
658 422.40 wind 1 14400 < th dose dependent rect. 6 18
669 422.44 humidity 50 10 > th dose independent rect. 4 16
702 422.57 wind 1 14400 > th dose independent sin 16 NA
724 422.67 temperature 15 1440 > th dose independent rect. 10 18
736 422.71 temperature 30 10 < th dose dependent rect. 15 7
740 422.73 wind 1 14400 < th dose dependent sin 18 NA
745 422.76 wind 3 14400 < th dose dependent rect. 14 2
758 422.82 humidity 90 4320 < th dose independent rect. 16 1
763 422.83 wind 3 14400 > th dose independent rect. 9 22
777 422.86 wind 1 14400 < th dose dependent rect. 7 21
798 422.91 radiation 40 10 < th dose dependent rect. 4 5
799 422.92 wind 9 14400 > th dose independent sin 14 NA
816 422.96 wind 3 14400 > th dose dependent rect. 13 18
819 422.97 wind 9 14400 > th dose independent rect. 14 18
821 422.97 wind 1 14400 < th dose independent rect. 10 19
840 423.01 wind 3 14400 < th dose dependent sin 22 NA
852 423.05 wind 1 14400 > th dose independent rect. 13 14
865 423.07 temperature 30 90 < th dose dependent sin 15 NA
867 423.08 temperature 10 270 > th dose dependent rect. 1 8
869 423.08 wind 3 14400 < th dose dependent rect. 14 10
879 423.10 wind 7 14400 > th dose dependent rect. 13 19
908 423.15 humidity 80 4320 > th dose dependent rect. 16 1
937 423.19 wind 3 14400 < th dose independent rect. 9 22
954 423.22 wind 9 14400 < th dose independent rect. 14 18
955 423.22 humidity 90 270 < th dose independent rect. 17 21
992 423.27 humidity 90 720 > th dose independent rect. 16 1