Os06g0640100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : E-class P450, group I family protein.
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Os06g0640100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : E-class P450, group I family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.52 | 0.522 | 8.14 | -5.54 | 0.951 | -82.4 | 0.714 | -245 | 0.798 | 6.7 | 1.022 | 1364 | 11 | 0.959 |
| 166.38 | 0.605 | 10.2 | 0.907 | 0.886 | 0.0736 | 1.14 | -- | 0.888 | 6.72 | 1.022 | 1364 | 11 | 0.959 |
| 124.8 | 0.52 | 8.14 | -5.53 | 0.953 | -82.4 | -- | -246 | 0.796 | 6.73 | 1.034 | 1364 | 11 | 0.983 |
| 155.49 | 0.581 | 10.2 | 0.924 | 0.861 | -0.546 | -- | -- | 0.822 | 6.43 | 15.66 | 1240 | 11.8 | 1.83 |
| 171.97 | 0.611 | 8.18 | -5.45 | -- | -82.4 | -- | -245 | 0.814 | -- | 1.645 | 1334 | 10.9 | 1.03 |
| 166.38 | 0.605 | 10.2 | 0.906 | 0.886 | -- | 1.14 | -- | 0.887 | 6.72 | -- | -- | -- | -- |
| 169.59 | 0.61 | 10.2 | 0.925 | 0.889 | -- | -- | -- | 0.885 | 6.87 | -- | -- | -- | -- |
| 190.78 | 0.643 | 10.2 | 0.931 | -- | -0.608 | -- | -- | 0.796 | -- | 23.25 | 1105 | 11.8 | 1.9 |
| 170.62 | 0.608 | 10.2 | -- | 0.839 | -0.829 | -- | -- | 0.746 | 6.45 | 11.32 | 1229 | 11.8 | 2.6 |
| 210.99 | 0.679 | 10.2 | 0.945 | -- | -- | -- | -- | 0.902 | -- | -- | -- | -- | -- |
| 192.16 | 0.648 | 10.2 | -- | 0.9 | -- | -- | -- | 0.782 | 6.8 | -- | -- | -- | -- |
| 206.78 | 0.67 | 10.2 | -- | -- | -0.67 | -- | -- | 0.752 | -- | 30.01 | 1104 | 11.8 | 2.27 |
| 234.53 | 0.715 | 10.2 | -- | -- | -- | -- | -- | 0.797 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.53 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 125.53 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 132.16 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 4 | 132.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 5 | 132.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 6 | 132.36 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 21 | 133.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 22 | 133.28 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 23 | 133.30 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 26 | 133.54 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 58 | 134.84 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 64 | 135.45 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 80 | 136.80 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 87 | 137.19 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 91 | 137.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 103 | 138.88 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 6 |
| 107 | 139.25 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 109 | 139.25 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 111 | 139.25 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 162 | 139.25 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 164 | 139.25 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 166 | 139.25 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 221 | 139.52 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 242 | 140.20 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 251 | 140.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 284 | 141.12 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 306 | 141.74 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 316 | 141.85 | wind | 9.0 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 397 | 143.14 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 454 | 143.98 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 494 | 144.50 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 496 | 144.52 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 530 | 144.92 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 565 | 145.28 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 593 | 145.62 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 620 | 145.92 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 18 | 7 |
| 622 | 145.92 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 631 | 146.02 | wind | 7.0 | 4320 | > th | dose independent | sin | 16 | NA |
| 637 | 146.11 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 650 | 146.21 | wind | 7.0 | 4320 | < th | dose independent | sin | 16 | NA |
| 687 | 146.51 | wind | 7.0 | 4320 | > th | dose dependent | sin | 15 | NA |
| 739 | 146.87 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 754 | 146.92 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 12 | 20 |
| 771 | 147.05 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 795 | 147.16 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 886 | 147.73 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |