Os06g0639800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0639800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.88 | 0.654 | 2.97 | -0.0512 | 0.0992 | 3.43 | -0.377 | 0.176 | 0.129 | 21.4 | 9.27 | 9 | -- | -- |
| 193.79 | 0.648 | 2.97 | -0.0534 | 0.0996 | 3.44 | -0.381 | -- | 0.128 | 21.4 | 9.3 | 8 | -- | -- |
| 194.24 | 0.649 | 2.97 | -0.0296 | 0.103 | 3.54 | -- | 0.389 | 0.133 | 20.9 | 9.3 | 8 | -- | -- |
| 194.15 | 0.649 | 2.97 | -0.0392 | 0.119 | 3.39 | -- | -- | 0.129 | 19.6 | 9.3 | 8 | -- | -- |
| 194.46 | 0.649 | 2.97 | -0.00506 | -- | 5.88 | -- | 6.89 | 0.141 | -- | 9.416 | 8 | -- | -- |
| 210.21 | 0.68 | 2.98 | -0.155 | 0.16 | -- | -0.412 | -- | 0.0912 | 18.6 | -- | -- | -- | -- |
| 210.58 | 0.68 | 2.98 | -0.148 | 0.162 | -- | -- | -- | 0.0905 | 17.9 | -- | -- | -- | -- |
| 194.91 | 0.65 | 2.97 | -0.0395 | -- | 3.42 | -- | -- | 0.128 | -- | 9.3 | 8 | -- | -- |
| 194.19 | 0.649 | 2.97 | -- | 0.119 | 3.41 | -- | -- | 0.133 | 19.5 | 9.3 | 8 | -- | -- |
| 211.94 | 0.68 | 2.98 | -0.153 | -- | -- | -- | -- | 0.0868 | -- | -- | -- | -- | -- |
| 211.15 | 0.68 | 2.98 | -- | 0.164 | -- | -- | -- | 0.107 | 17.9 | -- | -- | -- | -- |
| 194.95 | 0.65 | 2.97 | -- | -- | 3.44 | -- | -- | 0.132 | -- | 9.3 | 8 | -- | -- |
| 212.55 | 0.68 | 2.98 | -- | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 189.66 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 3 |
| 5 | 190.88 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 6 | 191.61 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 18 | 191.61 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 45 | 192.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 51 | 193.74 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 53 | 193.88 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 54 | 193.92 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 56 | 194.03 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 57 | 194.09 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 69 | 194.43 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 71 | 194.47 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 73 | 194.47 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 74 | 194.47 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 77 | 194.47 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 78 | 194.47 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 80 | 194.47 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 85 | 194.47 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 86 | 194.47 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 87 | 194.47 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 92 | 194.47 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 96 | 194.52 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 105 | 194.93 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 113 | 194.96 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 114 | 194.96 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 116 | 194.97 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 119 | 194.97 | wind | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 136 | 195.19 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 141 | 195.21 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 142 | 195.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 145 | 195.21 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 149 | 195.21 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 158 | 195.21 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 159 | 195.21 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 179 | 195.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 182 | 195.21 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 207 | 196.07 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 211 | 196.26 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 256 | 196.93 | radiation | 30.0 | 10 | > th | dose dependent | sin | 13 | NA |
| 261 | 197.19 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 330 | 198.25 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 340 | 198.64 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 357 | 198.64 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 393 | 199.21 | wind | 5.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 419 | 199.57 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 433 | 199.72 | radiation | 40.0 | 30 | > th | dose independent | sin | 13 | NA |
| 439 | 199.87 | radiation | 40.0 | 90 | > th | dose independent | rect. | 13 | 1 |
| 461 | 200.00 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 3 |
| 491 | 200.09 | humidity | 60.0 | 270 | < th | dose independent | rect. | 16 | 2 |
| 516 | 200.22 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 22 |
| 519 | 200.25 | temperature | 30.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 536 | 200.45 | wind | 3.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 558 | 200.57 | wind | 7.0 | 270 | > th | dose dependent | rect. | 3 | 11 |
| 560 | 200.59 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 562 | 200.61 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 12 |
| 626 | 200.95 | wind | 5.0 | 10 | < th | dose independent | rect. | 12 | 3 |
| 636 | 201.03 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 18 | 2 |
| 656 | 201.05 | wind | 7.0 | 30 | < th | dose dependent | rect. | 12 | 3 |
| 752 | 201.31 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 931 | 201.80 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 13 | 9 |
| 972 | 201.86 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 22 |
| 986 | 201.92 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 996 | 201.93 | wind | 9.0 | 10 | < th | dose independent | sin | 0 | NA |