Os06g0636700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipolytic enzyme, G-D-S-L family protein.
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Os06g0636700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipolytic enzyme, G-D-S-L family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 184.01 | 0.637 | 2.9 | 0.0756 | 0.12 | 0.194 | -0.533 | -3.47 | 0.0912 | 12.7 | 6.999 | 1464 | -- | -- |
| 184.95 | 0.633 | 2.94 | 0.105 | 0.134 | 0.699 | -0.447 | -- | 0.0801 | 13.3 | 7.392 | 2641 | -- | -- |
| 185.2 | 0.634 | 2.91 | 0.0503 | 0.121 | 0.19 | -- | -3.4 | 0.0855 | 12.7 | 7.191 | 1464 | -- | -- |
| 185.9 | 0.635 | 2.94 | 0.139 | 0.129 | 0.68 | -- | -- | 0.0861 | 12.9 | 7.994 | 2645 | -- | -- |
| 186.09 | 0.635 | 2.91 | 0.0418 | -- | 0.103 | -- | -3.74 | 0.0863 | -- | 7.313 | 1464 | -- | -- |
| 192.83 | 0.651 | 2.96 | -0.0205 | 0.109 | -- | -0.435 | -- | 0.0073 | 13 | -- | -- | -- | -- |
| 193.62 | 0.652 | 2.96 | -0.0362 | 0.109 | -- | -- | -- | 0.00498 | 13 | -- | -- | -- | -- |
| 185.41 | 0.634 | 2.94 | 0.093 | -- | 0.667 | -- | -- | 0.0836 | -- | 10.68 | 2580 | -- | -- |
| 186.38 | 0.636 | 2.94 | -- | 0.126 | 0.625 | -- | -- | 0.0729 | 12.9 | 8.086 | 2641 | -- | -- |
| 194.36 | 0.651 | 2.96 | -0.0403 | -- | -- | -- | -- | 0.00288 | -- | -- | -- | -- | -- |
| 193.66 | 0.651 | 2.96 | -- | 0.11 | -- | -- | -- | 0.00902 | 13 | -- | -- | -- | -- |
| 185.59 | 0.634 | 2.95 | -- | -- | 0.651 | -- | -- | 0.0603 | -- | 10.68 | 2625 | -- | -- |
| 194.41 | 0.651 | 2.96 | -- | -- | -- | -- | -- | 0.00736 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 171.54 | radiation | 1 | 30 | < th | dose independent | rect. | 11 | 3 |
| 9 | 171.54 | radiation | 1 | 30 | < th | dose dependent | rect. | 11 | 3 |
| 21 | 171.77 | humidity | 80 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 28 | 172.36 | radiation | 1 | 10 | < th | dose independent | rect. | 13 | 1 |
| 38 | 172.36 | radiation | 1 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 48 | 172.45 | humidity | 80 | 90 | > th | dose independent | rect. | 12 | 1 |
| 98 | 178.82 | humidity | 80 | 10 | > th | dose independent | rect. | 14 | 1 |
| 104 | 179.29 | wind | 5 | 10 | > th | dose independent | rect. | 19 | 20 |
| 105 | 179.33 | wind | 7 | 90 | > th | dose independent | rect. | 4 | 5 |
| 106 | 179.35 | wind | 7 | 30 | > th | dose independent | rect. | 19 | 16 |
| 107 | 179.45 | wind | 7 | 90 | > th | dose dependent | rect. | 7 | 2 |
| 111 | 179.49 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 115 | 179.49 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 130 | 179.92 | wind | 7 | 90 | > th | dose independent | rect. | 8 | 1 |
| 134 | 179.98 | humidity | 90 | 90 | > th | dose independent | rect. | 8 | 1 |
| 140 | 180.17 | humidity | 90 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 142 | 180.26 | wind | 7 | 10 | > th | dose independent | rect. | 19 | 1 |
| 144 | 180.26 | wind | 7 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 162 | 180.58 | wind | 7 | 90 | > th | dose independent | rect. | 18 | 1 |
| 164 | 180.67 | wind | 9 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 169 | 180.86 | humidity | 80 | 30 | < th | dose dependent | rect. | 22 | 2 |
| 171 | 180.87 | humidity | 80 | 30 | < th | dose independent | rect. | 22 | 2 |
| 185 | 180.96 | humidity | 80 | 720 | < th | dose independent | rect. | 24 | 1 |
| 187 | 180.96 | humidity | 80 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 195 | 181.06 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 4 |
| 201 | 181.06 | humidity | 80 | 10 | < th | dose dependent | rect. | 24 | 4 |
| 228 | 181.51 | wind | 5 | 30 | > th | dose dependent | rect. | 19 | 16 |
| 239 | 181.75 | wind | 7 | 90 | > th | dose dependent | rect. | 18 | 2 |
| 297 | 182.56 | wind | 3 | 10 | > th | dose dependent | rect. | 19 | 20 |
| 331 | 183.10 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 19 |
| 342 | 183.16 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 349 | 183.19 | wind | 5 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 369 | 183.29 | wind | 5 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 382 | 183.39 | wind | 5 | 10 | > th | dose dependent | rect. | 19 | 6 |
| 391 | 183.42 | wind | 7 | 1440 | < th | dose independent | rect. | 3 | 17 |
| 397 | 183.45 | wind | 7 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 398 | 183.45 | wind | 7 | 1440 | > th | dose independent | rect. | 4 | 16 |
| 401 | 183.46 | wind | 7 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 408 | 183.48 | wind | 7 | 1440 | > th | dose independent | rect. | 7 | 13 |
| 438 | 183.57 | wind | 9 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 498 | 183.65 | wind | 5 | 10 | > th | dose independent | rect. | 13 | 2 |
| 506 | 183.66 | wind | 5 | 1440 | > th | dose dependent | sin | 0 | NA |
| 509 | 183.67 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 516 | 183.67 | wind | 7 | 4320 | > th | dose dependent | rect. | 15 | 18 |
| 519 | 183.68 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 6 |
| 602 | 183.79 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 631 | 183.85 | wind | 9 | 1440 | > th | dose independent | sin | 20 | NA |
| 632 | 183.85 | wind | 7 | 1440 | > th | dose independent | sin | 0 | NA |
| 634 | 183.85 | wind | 9 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 657 | 183.88 | wind | 5 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 658 | 183.89 | wind | 7 | 1440 | < th | dose independent | sin | 0 | NA |
| 679 | 183.90 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 705 | 183.93 | wind | 9 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 761 | 183.96 | wind | 7 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 789 | 184.00 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 837 | 184.03 | wind | 5 | 10 | > th | dose independent | rect. | 5 | 10 |
| 883 | 184.07 | wind | 9 | 1440 | > th | dose independent | no | NA | NA |
| 981 | 184.09 | wind | 5 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 998 | 184.10 | wind | 7 | 1440 | < th | dose independent | rect. | 16 | 23 |