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Os06g0636600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0202) R2 : 0.772
β1 : 0.752 (0.074) R2dD : 0.0537 R2D : 0.0566
β2 : 1.81 (0.0479) R2dC : 0.714 R2C : 0.72
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0829 (0.0431) R2dN8 : 0.00247 R2N8 : -0.00261
σ : 0.38
deviance : 65.79
__
_____
C
peak time of C : 0.125
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
55.9 0.348 10.5 0.766 1.3 0.477 0.105 0.541 0.0658 0.118 10 10 -- --
56.32 0.35 10.5 0.737 1.27 0.512 0.675 -- 0.0848 0.172 8.87 13 -- --
55.93 0.348 10.5 0.777 1.31 0.471 -- 0.586 0.0671 0.11 9.994 11 -- --
58.27 0.356 10.5 0.727 1.24 0.53 -- -- 0.0835 0.14 8.85 13 -- --
81.37 0.42 10.5 0.681 -- 1.38 -- 0.451 0.146 -- 8.391 20 -- --
63.78 0.374 10.5 0.779 1.81 -- 0.682 -- 0.086 0.123 -- -- -- --
65.79 0.38 10.5 0.752 1.81 -- -- -- 0.0829 0.125 -- -- -- --
82.33 0.423 10.4 0.671 -- 1.37 -- -- 0.15 -- 8.392 20 -- --
72.14 0.396 10.5 -- 1.22 0.572 -- -- 0.0657 0.234 8.853 13 -- --
271.3 0.77 10.5 0.81 -- -- -- -- 0.109 -- -- -- -- --
80.71 0.42 10.5 -- 1.82 -- -- -- -0.000918 0.148 -- -- -- --
94.02 0.452 10.5 -- -- 1.38 -- -- 0.0916 -- 8.17 24 -- --
288.61 0.793 10.5 -- -- -- -- -- 0.0194 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.41 humidity 60.0 90 > th dose independent rect. 6 20
2 45.94 humidity 60.0 90 > th dose independent rect. 6 7
15 47.62 temperature 10.0 270 > th dose dependent rect. 24 5
16 47.76 temperature 10.0 270 > th dose dependent rect. 1 3
18 47.86 temperature 10.0 270 > th dose dependent rect. 2 1
21 48.02 radiation 30.0 90 < th dose independent rect. 13 17
25 48.07 wind 9.0 270 < th dose dependent rect. 23 6
29 48.12 humidity 50.0 270 > th dose dependent rect. 5 8
30 48.15 precipitation 0.1 270 < th dose independent rect. 5 18
31 48.15 precipitation 0.1 270 < th dose dependent rect. 5 18
32 48.16 humidity 60.0 10 > th dose independent rect. 7 6
36 48.19 precipitation 0.1 270 < th dose independent rect. 4 21
37 48.19 precipitation 0.1 270 < th dose dependent rect. 4 21
38 48.21 radiation 40.0 270 < th dose independent rect. 5 6
39 48.21 atmosphere 995.0 270 > th dose independent rect. 13 16
42 48.22 humidity 60.0 270 > th dose independent rect. 18 16
46 48.29 wind 5.0 270 < th dose independent rect. 24 5
47 48.29 wind 9.0 270 < th dose dependent rect. 2 1
48 48.31 radiation 1.0 270 < th dose dependent rect. 24 5
55 48.37 radiation 1.0 270 < th dose independent rect. 24 5
57 48.37 precipitation 0.1 90 < th dose independent rect. 6 9
58 48.37 radiation 40.0 90 < th dose independent rect. 15 15
59 48.37 precipitation 0.1 90 < th dose dependent rect. 6 9
67 48.39 temperature 10.0 270 > th dose independent rect. 24 5
69 48.39 temperature 30.0 270 < th dose independent rect. 24 5
70 48.39 humidity 50.0 270 > th dose independent rect. 24 5
73 48.39 atmosphere 995.0 270 > th dose independent rect. 24 5
77 48.39 humidity 50.0 270 > th dose independent rect. 16 9
78 48.39 temperature 10.0 270 > th dose independent rect. 5 19
79 48.40 atmosphere 1010.0 270 < th dose independent rect. 24 5
82 48.40 wind 7.0 270 < th dose independent rect. 1 16
84 48.43 wind 9.0 270 < th dose independent rect. 2 1
85 48.43 temperature 10.0 270 > th dose independent rect. 2 1
87 48.43 temperature 30.0 270 < th dose independent rect. 2 1
88 48.43 humidity 50.0 270 > th dose independent rect. 2 1
91 48.43 atmosphere 995.0 270 > th dose independent rect. 2 1
92 48.43 atmosphere 1010.0 270 < th dose independent rect. 2 1
94 48.43 radiation 1.0 270 < th dose independent rect. 2 1
100 48.43 temperature 10.0 270 > th dose independent rect. 3 23
101 48.43 radiation 1.0 270 < th dose dependent rect. 2 1
107 48.44 precipitation 0.1 270 < th dose independent rect. 2 1
109 48.44 precipitation 0.1 270 < th dose dependent rect. 2 1
110 48.44 wind 9.0 90 < th dose dependent rect. 2 4
112 48.44 atmosphere 995.0 270 > th dose dependent rect. 24 5
118 48.48 wind 9.0 270 < th dose independent rect. 1 3
119 48.48 temperature 10.0 270 > th dose independent rect. 1 3
121 48.48 temperature 30.0 270 < th dose independent rect. 1 3
122 48.48 humidity 50.0 270 > th dose independent rect. 1 3
125 48.48 atmosphere 995.0 270 > th dose independent rect. 1 3
126 48.48 atmosphere 1010.0 270 < th dose independent rect. 1 3
128 48.48 radiation 1.0 270 < th dose independent rect. 1 3
133 48.48 temperature 10.0 270 > th dose independent rect. 4 21
134 48.48 radiation 1.0 270 < th dose dependent rect. 1 3
142 48.49 humidity 50.0 270 > th dose dependent rect. 5 6
144 48.51 temperature 10.0 90 > th dose independent rect. 6 9
145 48.51 atmosphere 1015.0 90 < th dose independent rect. 6 9
146 48.51 temperature 10.0 90 > th dose independent rect. 15 15
147 48.51 radiation 40.0 270 < th dose independent rect. 18 16
172 48.56 atmosphere 995.0 270 > th dose independent rect. 5 8
174 48.56 wind 9.0 90 < th dose independent rect. 15 15
175 48.56 temperature 10.0 270 > th dose independent rect. 13 16
184 48.61 atmosphere 995.0 90 > th dose independent rect. 15 15
186 48.62 humidity 50.0 270 > th dose dependent rect. 2 1
188 48.62 radiation 40.0 10 < th dose dependent rect. 2 5
192 48.63 wind 9.0 270 < th dose independent rect. 13 16
193 48.63 atmosphere 995.0 270 > th dose dependent rect. 1 3
197 48.65 wind 9.0 270 < th dose independent rect. 5 19
213 48.66 precipitation 0.1 270 < th dose independent rect. 24 5
214 48.66 humidity 60.0 90 > th dose independent rect. 18 8
216 48.66 temperature 10.0 10 > th dose dependent rect. 2 5
217 48.66 precipitation 0.1 270 < th dose dependent rect. 24 5
220 48.67 atmosphere 995.0 270 > th dose independent rect. 1 16
222 48.67 humidity 50.0 10 > th dose dependent rect. 2 5
223 48.68 radiation 20.0 270 < th dose independent rect. 16 9
229 48.71 radiation 10.0 30 < th dose independent rect. 2 6
233 48.72 wind 9.0 270 < th dose independent rect. 5 8
249 48.73 wind 9.0 10 < th dose independent rect. 2 5
250 48.73 temperature 10.0 10 > th dose independent rect. 2 5
252 48.73 temperature 30.0 10 < th dose independent rect. 2 5
253 48.73 humidity 50.0 10 > th dose independent rect. 2 5
256 48.73 atmosphere 995.0 10 > th dose independent rect. 2 5
257 48.73 atmosphere 1015.0 10 < th dose independent rect. 2 5
261 48.73 temperature 10.0 10 > th dose independent rect. 7 19
264 48.74 precipitation 0.1 270 < th dose independent rect. 1 3
266 48.74 precipitation 0.1 270 < th dose dependent rect. 1 3
269 48.75 humidity 50.0 270 > th dose dependent rect. 23 6
272 48.76 wind 9.0 10 < th dose dependent rect. 2 5
278 48.78 precipitation 0.1 10 < th dose independent rect. 7 19
283 48.78 precipitation 0.1 10 < th dose dependent rect. 7 19
286 48.80 temperature 30.0 30 < th dose independent rect. 18 8
287 48.80 radiation 1.0 90 > th dose independent rect. 6 9
298 48.84 wind 9.0 270 < th dose independent rect. 4 21
299 48.84 humidity 50.0 270 > th dose dependent rect. 1 3
303 48.85 radiation 1.0 270 < th dose dependent sin 7 NA
306 48.85 radiation 40.0 270 < th dose dependent rect. 16 9
307 48.85 radiation 10.0 90 < th dose dependent rect. 2 15
312 48.87 precipitation 0.1 90 < th dose independent rect. 18 8
316 48.87 precipitation 0.1 90 < th dose dependent rect. 18 8
319 48.88 radiation 10.0 90 < th dose dependent sin 5 NA
320 48.88 atmosphere 995.0 270 > th dose dependent rect. 2 1
323 48.90 radiation 1.0 90 < th dose independent rect. 18 8
337 48.93 radiation 1.0 90 < th dose dependent rect. 18 8
375 49.04 precipitation 0.1 270 < th dose independent rect. 16 9
378 49.04 precipitation 0.1 270 < th dose dependent rect. 16 9
412 49.10 temperature 10.0 270 > th dose independent rect. 17 8
417 49.10 temperature 10.0 270 > th dose independent rect. 1 16
418 49.10 atmosphere 1015.0 270 < th dose independent rect. 1 16
423 49.11 wind 9.0 270 < th dose independent rect. 17 8
428 49.12 precipitation 0.1 270 < th dose independent rect. 3 23
430 49.12 precipitation 0.1 270 < th dose dependent rect. 3 23
437 49.16 wind 9.0 10 < th dose independent rect. 7 19
442 49.18 radiation 40.0 10 < th dose dependent rect. 14 17
446 49.21 radiation 10.0 10 < th dose independent rect. 2 17
452 49.22 atmosphere 1015.0 270 < th dose independent rect. 5 19
454 49.22 radiation 1.0 270 < th dose dependent rect. 24 17
463 49.26 wind 9.0 1440 < th dose independent rect. 3 5
464 49.26 temperature 10.0 1440 > th dose independent rect. 3 5
467 49.26 temperature 30.0 1440 < th dose independent rect. 3 5
471 49.26 humidity 50.0 1440 > th dose independent rect. 3 5
476 49.26 atmosphere 995.0 1440 > th dose independent rect. 3 5
478 49.26 temperature 10.0 1440 > th dose independent rect. 8 19
517 49.34 radiation 1.0 270 < th dose independent rect. 23 18
532 49.37 radiation 1.0 270 < th dose dependent rect. 24 9
536 49.38 precipitation 0.1 270 < th dose independent rect. 18 16
541 49.38 precipitation 0.1 270 < th dose dependent rect. 18 16
561 49.42 radiation 40.0 90 < th dose dependent rect. 13 17
572 49.45 radiation 1.0 270 > th dose independent sin 7 NA
574 49.45 temperature 10.0 1440 > th dose independent rect. 19 8
577 49.45 temperature 30.0 1440 < th dose independent rect. 19 8
581 49.45 humidity 50.0 1440 > th dose independent rect. 19 8
583 49.45 atmosphere 995.0 1440 > th dose independent rect. 19 8
584 49.45 radiation 1.0 1440 < th dose independent rect. 19 8
604 49.45 temperature 10.0 1440 > th dose independent rect. 3 16
615 49.46 radiation 20.0 1440 < th dose dependent rect. 19 8
618 49.46 wind 9.0 90 < th dose dependent rect. 15 15
634 49.50 radiation 40.0 270 < th dose independent rect. 5 8
664 49.52 radiation 1.0 270 < th dose independent sin 7 NA
673 49.54 atmosphere 995.0 270 > th dose independent rect. 11 18
681 49.56 radiation 1.0 270 < th dose independent rect. 23 10
686 49.57 humidity 50.0 270 > th dose dependent rect. 6 4
694 49.58 atmosphere 1015.0 10 < th dose independent rect. 7 19
712 49.61 precipitation 0.1 270 < th dose independent rect. 5 6
716 49.61 precipitation 0.1 270 < th dose dependent rect. 5 6
747 49.65 temperature 10.0 270 > th dose independent rect. 5 6
748 49.65 atmosphere 995.0 270 > th dose independent rect. 5 6
749 49.65 atmosphere 1015.0 270 < th dose independent rect. 5 6
752 49.65 temperature 10.0 270 > th dose independent rect. 11 18
789 49.69 wind 1.0 270 > th dose independent rect. 1 3
792 49.69 wind 9.0 270 < th dose independent rect. 11 18
813 49.72 wind 9.0 270 < th dose independent rect. 5 6
843 49.76 wind 9.0 270 < th dose dependent rect. 13 16
876 49.81 precipitation 0.1 90 < th dose independent rect. 2 16
882 49.81 precipitation 0.1 90 < th dose dependent rect. 2 16
893 49.83 atmosphere 995.0 90 > th dose independent rect. 18 8
989 49.94 wind 1.0 270 > th dose independent rect. 17 8
992 49.94 radiation 40.0 270 < th dose independent rect. 5 19
993 49.94 wind 9.0 270 < th dose independent rect. 3 23
996 49.95 wind 9.0 270 < th dose independent rect. 10 8