Os06g0634600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function FAF1 domain containing protein.
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Os06g0634600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function FAF1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.25 | 0.333 | 12 | 0.56 | 0.732 | 0.123 | 0.0962 | -4.53 | 0.276 | 18.8 | 31 | 1176 | -- | -- |
| 51.72 | 0.335 | 12 | 1.3 | 0.747 | -0.384 | 0.0993 | -- | 0.303 | 18.8 | 32 | 5508 | -- | -- |
| 50.26 | 0.33 | 12 | 0.55 | 0.732 | 0.134 | -- | -4.61 | 0.278 | 18.8 | 31.2 | 1175 | -- | -- |
| 51.1 | 0.333 | 11.9 | 1.28 | 0.721 | -0.375 | -- | -- | 0.292 | 18.9 | 31.19 | 1192 | -- | -- |
| 78.08 | 0.412 | 12 | 0.499 | -- | 0.128 | -- | -4.69 | 0.265 | -- | 30.8 | 1257 | -- | -- |
| 58.13 | 0.357 | 11.9 | 1.19 | 0.749 | -- | 0.0988 | -- | 0.348 | 18.5 | -- | -- | -- | -- |
| 58.16 | 0.357 | 11.9 | 1.19 | 0.75 | -- | -- | -- | 0.349 | 18.5 | -- | -- | -- | -- |
| 79.51 | 0.415 | 11.9 | 1.28 | -- | -0.396 | -- | -- | 0.257 | -- | 30.32 | 1282 | -- | -- |
| 93.06 | 0.449 | 12 | -- | 0.725 | -0.215 | -- | -- | 0.174 | 18.8 | 32.65 | 1154 | -- | -- |
| 87.4 | 0.437 | 11.9 | 1.17 | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
| 95.45 | 0.457 | 12 | -- | 0.734 | -- | -- | -- | 0.216 | 18.6 | -- | -- | -- | -- |
| 115.69 | 0.501 | 12 | -- | -- | 0.515 | -- | -- | 0.163 | -- | 24.3 | 363 | -- | -- |
| 123.56 | 0.519 | 11.9 | -- | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.57 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 3 | 43.82 | radiation | 1.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 5 | 43.86 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 7 | 43.92 | radiation | 1.0 | 90 | < th | dose independent | sin | 12 | NA |
| 8 | 43.96 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 10 | 44.00 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 17 | 44.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 18 | 44.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 24 | 44.47 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 37 | 44.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 40 | 44.79 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 43 | 44.81 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 45 | 44.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 47 | 44.82 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 48 | 44.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 50 | 44.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 51 | 44.82 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 52 | 44.82 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 53 | 44.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 55 | 44.83 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 90 | 44.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 91 | 44.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 98 | 45.03 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 152 | 45.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 163 | 45.26 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 165 | 45.28 | wind | 7.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 175 | 45.39 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 209 | 45.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 218 | 45.54 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 220 | 45.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 224 | 45.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 228 | 45.60 | wind | 3.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 236 | 45.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 242 | 45.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 247 | 45.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 248 | 45.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 249 | 45.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 250 | 45.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 17 |
| 253 | 45.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 258 | 45.70 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 278 | 45.83 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 322 | 45.98 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 4 |
| 323 | 45.98 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 324 | 45.98 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 325 | 45.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 326 | 45.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 333 | 46.03 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 337 | 46.04 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 338 | 46.04 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 359 | 46.09 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 383 | 46.13 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 385 | 46.13 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 386 | 46.13 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 388 | 46.13 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 389 | 46.13 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 391 | 46.13 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 406 | 46.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 7 |
| 408 | 46.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 409 | 46.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 411 | 46.20 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 413 | 46.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 416 | 46.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 419 | 46.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 420 | 46.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 421 | 46.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 422 | 46.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 429 | 46.24 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 464 | 46.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 515 | 46.46 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 516 | 46.46 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 525 | 46.47 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 562 | 46.54 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 571 | 46.55 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 20 |
| 586 | 46.57 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 609 | 46.62 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 623 | 46.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 628 | 46.68 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 12 |
| 632 | 46.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 671 | 46.75 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 692 | 46.78 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 703 | 46.80 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 736 | 46.85 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 17 |
| 768 | 46.89 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 847 | 46.99 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 853 | 47.00 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 875 | 47.06 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 903 | 47.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 921 | 47.15 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 946 | 47.23 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 947 | 47.23 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 954 | 47.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 986 | 47.29 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |