Os06g0632700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ferritin/ribonucleotide reductase-like family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0632700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ferritin/ribonucleotide reductase-like family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.68 | 0.452 | 6.6 | 2.11 | 1.07 | -1.15 | 0.0834 | 2.07 | 0.058 | 15.7 | 0.1703 | 751 | -- | -- |
| 96.45 | 0.457 | 6.61 | 2.13 | 0.781 | -0.928 | 0.99 | -- | 0.0237 | 15.9 | 1.089 | 875 | -- | -- |
| 91.11 | 0.445 | 6.59 | 2.15 | 1 | -1.27 | -- | 2.41 | 0.0826 | 16.1 | 0.2261 | 835 | -- | -- |
| 96.94 | 0.459 | 6.62 | 2.09 | 1.06 | -1.42 | -- | -- | 0.0465 | 16.6 | 0.23 | 874 | -- | -- |
| 104.84 | 0.48 | 6.62 | 1.89 | -- | 0.42 | -- | 0.136 | -0.0105 | -- | 0.2261 | 835 | -- | -- |
| 102.88 | 0.476 | 6.61 | 1.91 | 0.584 | -- | 0.308 | -- | -0.00744 | 12.3 | -- | -- | -- | -- |
| 103.24 | 0.476 | 6.61 | 1.92 | 0.584 | -- | -- | -- | -0.00664 | 12.1 | -- | -- | -- | -- |
| 104.96 | 0.479 | 6.62 | 1.89 | -- | 0.421 | -- | -- | -0.0111 | -- | 0.2261 | 835 | -- | -- |
| 198.13 | 0.659 | 6.66 | -- | 0.214 | 0.297 | -- | -- | -0.219 | 12.5 | 0.23 | 874 | -- | -- |
| 124.69 | 0.522 | 6.62 | 1.9 | -- | -- | -- | -- | -0.0152 | -- | -- | -- | -- | -- |
| 200.32 | 0.662 | 6.66 | -- | 0.559 | -- | -- | -- | -0.22 | 11.9 | -- | -- | -- | -- |
| 198.64 | 0.659 | 6.67 | -- | -- | 0.436 | -- | -- | -0.226 | -- | 0.5649 | 1701 | -- | -- |
| 219.98 | 0.692 | 6.67 | -- | -- | -- | -- | -- | -0.226 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.79 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 2 | 85.82 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 3 | 87.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 4 | 87.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 5 | 87.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 6 | 87.60 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 7 | 87.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 8 | 87.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 9 | 87.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 12 | 87.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 13 | 87.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 14 | 87.93 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 15 | 87.95 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 10 |
| 21 | 88.25 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 27 | 88.40 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 17 |
| 43 | 88.68 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 49 | 88.77 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 53 | 88.89 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 67 | 89.08 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 70 | 89.08 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 76 | 89.10 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 79 | 89.12 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 80 | 89.15 | temperature | 25.0 | 720 | > th | dose independent | rect. | 13 | 8 |
| 84 | 89.21 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 88 | 89.26 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 99 | 89.28 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 5 |
| 106 | 89.36 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 113 | 89.42 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 118 | 89.58 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 135 | 89.63 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 139 | 89.67 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 148 | 89.74 | radiation | 1.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 175 | 89.90 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 179 | 89.92 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 224 | 90.12 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 237 | 90.25 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 247 | 90.39 | radiation | 1.0 | 720 | < th | dose independent | sin | 17 | NA |
| 248 | 90.40 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 270 | 90.55 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 281 | 90.62 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 319 | 90.74 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 342 | 90.89 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 347 | 90.94 | temperature | 25.0 | 720 | < th | dose independent | rect. | 14 | 10 |
| 364 | 91.13 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 426 | 91.37 | temperature | 25.0 | 720 | > th | dose independent | sin | 18 | NA |
| 427 | 91.38 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 23 | 18 |
| 432 | 91.41 | wind | 5.0 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 438 | 91.44 | wind | 5.0 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 443 | 91.45 | wind | 5.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 481 | 91.62 | radiation | 1.0 | 720 | > th | dose independent | sin | 20 | NA |
| 484 | 91.63 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 18 |
| 489 | 91.65 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 2 |
| 510 | 91.68 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 518 | 91.72 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 536 | 91.82 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 570 | 91.92 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 581 | 91.96 | temperature | 25.0 | 720 | < th | dose independent | rect. | 12 | 18 |
| 589 | 91.99 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 8 |
| 601 | 92.02 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 13 |
| 618 | 92.05 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 647 | 92.11 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 649 | 92.13 | temperature | 25.0 | 720 | < th | dose independent | sin | 16 | NA |
| 652 | 92.13 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 657 | 92.16 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 660 | 92.17 | humidity | 70.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 668 | 92.19 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 671 | 92.20 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 675 | 92.20 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 688 | 92.23 | humidity | 70.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 791 | 92.42 | radiation | 1.0 | 720 | > th | dose independent | sin | 15 | NA |
| 863 | 92.48 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 15 |
| 923 | 92.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 946 | 92.65 | radiation | 1.0 | 720 | < th | dose independent | rect. | 23 | 17 |
| 968 | 92.69 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 977 | 92.71 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 980 | 92.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |