Os06g0626600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sulfotransferase family protein.
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Os06g0626600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sulfotransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.94 | 0.556 | 5.07 | 0.81 | 0.281 | 1.34 | 0.189 | -0.621 | 0.114 | 12.4 | 23.74 | 4124 | -- | -- |
| 140.72 | 0.552 | 5.08 | 0.657 | 0.289 | 1.37 | 0.0766 | -- | 0.093 | 11.9 | 23.79 | 4111 | -- | -- |
| 140.07 | 0.551 | 5.07 | 0.804 | 0.279 | 1.34 | -- | -0.585 | 0.113 | 12.7 | 23.7 | 4110 | -- | -- |
| 140.47 | 0.552 | 5.1 | 0.605 | 0.277 | 1.32 | -- | -- | 0.0542 | 12.7 | 23.75 | 4105 | -- | -- |
| 144.37 | 0.56 | 5.06 | 0.856 | -- | 1.45 | -- | -0.714 | 0.124 | -- | 23.95 | 4035 | -- | -- |
| 201.16 | 0.665 | 5.2 | -0.0272 | 0.424 | -- | 0.182 | -- | -0.394 | 13.1 | -- | -- | -- | -- |
| 201.29 | 0.664 | 5.2 | -0.0205 | 0.424 | -- | -- | -- | -0.393 | 13.2 | -- | -- | -- | -- |
| 144.85 | 0.561 | 5.1 | 0.617 | -- | 1.4 | -- | -- | 0.0706 | -- | 23.81 | 4037 | -- | -- |
| 148.91 | 0.568 | 5.13 | -- | 0.28 | 1.18 | -- | -- | -0.0807 | 12.8 | 23.97 | 4081 | -- | -- |
| 212.43 | 0.681 | 5.2 | -0.0368 | -- | -- | -- | -- | -0.401 | -- | -- | -- | -- | -- |
| 201.3 | 0.664 | 5.2 | -- | 0.425 | -- | -- | -- | -0.39 | 13.2 | -- | -- | -- | -- |
| 153.42 | 0.577 | 5.13 | -- | -- | 1.23 | -- | -- | -0.0637 | -- | 23.92 | 3987 | -- | -- |
| 212.46 | 0.68 | 5.2 | -- | -- | -- | -- | -- | -0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 4 | 137.62 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 5 | 137.63 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 7 | 137.76 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 8 | 137.93 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 9 | 137.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 10 | 137.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 17 | 138.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 19 | 138.19 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 23 | 138.25 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 32 | 138.37 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 58 | 138.73 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 121 | 139.45 | temperature | 20 | 4320 | > th | dose dependent | sin | 16 | NA |
| 164 | 139.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 248 | 140.31 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 258 | 140.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 9 |
| 296 | 140.53 | temperature | 25 | 4320 | < th | dose independent | sin | 16 | NA |
| 302 | 140.56 | temperature | 20 | 4320 | > th | dose dependent | rect. | 16 | 20 |
| 305 | 140.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 16 |
| 335 | 140.65 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 20 |
| 371 | 140.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 400 | 140.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 421 | 140.84 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 426 | 140.86 | temperature | 10 | 4320 | > th | dose dependent | sin | 17 | NA |
| 435 | 140.88 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 23 |
| 436 | 140.89 | temperature | 20 | 1440 | > th | dose dependent | sin | 9 | NA |
| 470 | 140.99 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 23 |
| 486 | 141.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 10 |
| 512 | 141.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 524 | 141.16 | temperature | 25 | 4320 | > th | dose independent | sin | 16 | NA |
| 567 | 141.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 589 | 141.34 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 21 |
| 629 | 141.43 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 633 | 141.43 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 18 |
| 720 | 141.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 734 | 141.66 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 736 | 141.66 | temperature | 30 | 4320 | < th | dose dependent | sin | 16 | NA |
| 762 | 141.72 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 780 | 141.75 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 20 |
| 792 | 141.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 835 | 141.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 20 |
| 868 | 141.94 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 873 | 141.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 936 | 142.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 969 | 142.15 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 20 |
| 974 | 142.15 | temperature | 10 | 4320 | > th | dose dependent | rect. | 16 | 19 |
| 992 | 142.19 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |