FiT-DB / Search/ Help/ Sample detail

Os06g0626200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0156) R2 : 0.08
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.207 (0.0329) R2dN8 : 0.103 R2N8 : 0.08
σ : 0.294
deviance : 39.77
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.66 0.219 12.3 -0.349 0.313 0.549 0.354 -0.388 -0.228 23.9 29.3 650 -- --
21.67 0.217 12.3 -0.362 0.31 0.504 0.402 -- -0.222 23.7 29 647 -- --
22.19 0.219 12.3 -0.346 0.312 0.555 -- -0.537 -0.225 23.9 29.23 649 -- --
22.2 0.219 12.3 -0.39 0.308 0.502 -- -- -0.226 23.7 28.9 639 -- --
26.25 0.239 12.3 -0.418 -- 0.371 -- 0.123 -0.237 -- 28.5 320 -- --
26.54 0.242 12.3 -0.485 0.336 -- 0.345 -- -0.267 2.4 -- -- -- --
26.97 0.243 12.3 -0.494 0.338 -- -- -- -0.269 2.46 -- -- -- --
26.21 0.238 12.3 -0.414 -- 0.404 -- -- -0.222 -- 28.51 350 -- --
26.42 0.239 12.3 -- 0.323 0.575 -- -- -0.18 23.3 28.88 646 -- --
33.69 0.271 12.3 -0.48 -- -- -- -- -0.26 -- -- -- -- --
33.42 0.27 12.3 -- 0.328 -- -- -- -0.214 2.43 -- -- -- --
30.67 0.258 12.3 -- -- 0.434 -- -- -0.168 -- 28.5 347 -- --
39.77 0.294 12.3 -- -- -- -- -- -0.207 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.48 temperature 10 270 > th dose dependent rect. 11 9
2 20.51 humidity 70 270 > th dose independent rect. 14 11
3 20.51 humidity 50 270 > th dose dependent rect. 15 10
11 20.71 humidity 90 270 < th dose independent rect. 11 9
12 20.71 temperature 30 270 < th dose independent rect. 15 10
18 20.81 radiation 10 270 < th dose dependent rect. 13 12
22 20.88 radiation 1 270 < th dose independent rect. 15 10
25 20.89 temperature 30 270 < th dose independent rect. 7 17
39 20.94 radiation 1 270 < th dose independent rect. 8 17
48 20.97 radiation 20 4320 > th dose dependent rect. 6 2
85 21.12 humidity 90 270 < th dose dependent rect. 12 8
94 21.15 radiation 10 4320 > th dose dependent rect. 17 1
111 21.17 wind 3 270 > th dose independent rect. 11 8
152 21.32 radiation 30 4320 < th dose independent rect. 16 17
158 21.33 radiation 30 4320 < th dose independent rect. 24 9
168 21.34 radiation 20 4320 > th dose independent rect. 6 2
170 21.34 radiation 30 4320 < th dose independent rect. 6 3
176 21.34 radiation 30 4320 < th dose independent rect. 2 7
207 21.38 radiation 40 14400 < th dose dependent rect. 18 8
213 21.39 temperature 10 270 > th dose dependent rect. 13 17
227 21.41 humidity 50 270 > th dose dependent rect. 7 17
257 21.45 radiation 1 270 > th dose independent sin 16 NA
264 21.46 radiation 1 270 < th dose independent sin 16 NA
277 21.48 humidity 50 270 > th dose independent rect. 7 17
283 21.49 wind 3 43200 > th dose independent rect. 2 2
290 21.49 wind 1 43200 > th dose dependent rect. 1 13
293 21.49 temperature 10 270 > th dose dependent rect. 1 19
295 21.50 wind 3 43200 < th dose independent rect. 2 2
297 21.50 radiation 30 14400 < th dose independent rect. 16 12
309 21.51 radiation 30 14400 < th dose independent rect. 16 10
327 21.52 wind 7 43200 < th dose dependent rect. 2 12
349 21.55 radiation 10 4320 < th dose independent rect. 17 1
359 21.55 radiation 10 4320 < th dose independent rect. 17 10
370 21.55 wind 7 43200 < th dose dependent rect. 4 10
378 21.56 radiation 1 270 < th dose dependent sin 17 NA
412 21.57 wind 3 43200 > th dose independent rect. 2 12
421 21.57 temperature 25 270 > th dose dependent sin 17 NA
435 21.58 wind 1 43200 > th dose dependent sin 5 NA
436 21.58 wind 9 43200 < th dose dependent rect. 9 2
447 21.59 radiation 30 14400 < th dose independent rect. 16 1
452 21.59 wind 5 43200 < th dose dependent rect. 10 1
453 21.59 wind 1 43200 > th dose dependent rect. 9 2
475 21.60 radiation 30 4320 > th dose dependent rect. 15 18
479 21.61 wind 7 43200 < th dose dependent sin 5 NA
484 21.61 wind 1 43200 > th dose dependent rect. 4 7
505 21.62 wind 9 43200 < th dose dependent rect. 4 7
535 21.64 wind 3 43200 < th dose independent rect. 2 10
542 21.64 radiation 10 14400 < th dose dependent rect. 18 1
548 21.64 temperature 15 10 > th dose dependent rect. 14 8
561 21.65 wind 3 43200 < th dose independent rect. 10 1
619 21.67 radiation 10 14400 < th dose dependent rect. 18 5
644 21.68 wind 3 43200 < th dose independent rect. 4 1
650 21.68 radiation 10 4320 < th dose independent rect. 17 6
675 21.68 temperature 25 270 > th dose dependent rect. 12 19
765 21.72 wind 3 43200 > th dose independent sin 6 NA
838 21.75 wind 3 43200 > th dose independent rect. 10 2
900 21.76 humidity 80 270 < th dose dependent rect. 13 13
919 21.77 humidity 70 270 > th dose independent sin 16 NA
946 21.78 radiation 30 14400 < th dose independent rect. 16 7
979 21.79 wind 3 43200 < th dose independent sin 6 NA
989 21.79 temperature 25 90 > th dose dependent sin 14 NA