Os06g0625900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Potassium transporter 10 (OsHAK10).
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Os06g0625900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Potassium transporter 10 (OsHAK10).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.96 | 0.472 | 10.8 | -0.871 | 0.466 | -1.85 | -1.13 | 0.876 | -0.349 | 16.5 | 18.1 | 485 | -- | -- |
| 101.39 | 0.469 | 10.8 | -1.04 | 0.44 | -1.87 | -0.966 | -- | -0.392 | 16.5 | 17.01 | 496 | -- | -- |
| 103.85 | 0.475 | 10.8 | -0.946 | 0.569 | -1.89 | -- | 0.435 | -0.383 | 16 | 18.35 | 397 | -- | -- |
| 103.69 | 0.474 | 10.8 | -1.06 | 0.568 | -1.82 | -- | -- | -0.398 | 15.7 | 18.65 | 377 | -- | -- |
| 107.49 | 0.483 | 10.8 | -0.821 | -- | -1.57 | -- | 0.373 | -0.357 | -- | 16.99 | 2130 | -- | -- |
| 157.52 | 0.588 | 10.9 | -1.52 | 0.306 | -- | 0.283 | -- | -0.72 | 8.94 | -- | -- | -- | -- |
| 157.6 | 0.588 | 10.9 | -1.51 | 0.305 | -- | -- | -- | -0.718 | 9.67 | -- | -- | -- | -- |
| 107.87 | 0.484 | 10.8 | -0.921 | -- | -1.56 | -- | -- | -0.384 | -- | 17 | 2169 | -- | -- |
| 128.75 | 0.528 | 10.8 | -- | 0.47 | -2.3 | -- | -- | -0.238 | 18 | 16.72 | 606 | -- | -- |
| 163.12 | 0.597 | 10.9 | -1.51 | -- | -- | -- | -- | -0.718 | -- | -- | -- | -- | -- |
| 217.5 | 0.69 | 10.8 | -- | 0.31 | -- | -- | -- | -0.55 | 10 | -- | -- | -- | -- |
| 122.65 | 0.516 | 10.8 | -- | -- | -2.1 | -- | -- | -0.244 | -- | 10.2 | 3819 | -- | -- |
| 223.28 | 0.697 | 10.8 | -- | -- | -- | -- | -- | -0.55 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.03 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 2 | 94.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 77 | 99.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 84 | 99.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 86 | 99.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 156 | 100.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 164 | 101.02 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 165 | 101.02 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 174 | 101.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 214 | 101.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 266 | 101.82 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 284 | 101.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 290 | 101.99 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 304 | 102.07 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 317 | 102.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 376 | 102.38 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 506 | 102.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 519 | 102.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 533 | 102.86 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 614 | 103.06 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 736 | 103.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 789 | 103.43 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 947 | 103.72 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |