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Os06g0624900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0221) R2 : 0.287
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.589 (0.0566) R2dC : 0.17 R2C : 0.14
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.397 (0.0465) R2dN8 : 0.147 R2N8 : 0.117
σ : 0.416
deviance : 79.23
__
_____
C
peak time of C : 7.84
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.21 0.33 13.3 0.773 0.53 -0.454 0.00904 -1.2 0.534 7.38 35.48 1221 -- --
51.45 0.334 13.3 0.882 0.519 -0.499 0.172 -- 0.579 7.47 34.55 1223 -- --
49.19 0.327 13.3 0.771 0.524 -0.453 -- -1.24 0.535 7.35 36.06 1183 -- --
51.48 0.334 13.3 0.908 0.523 -0.502 -- -- 0.577 7.37 34.91 1223 -- --
59.32 0.359 13.3 0.784 -- -0.695 -- -1.34 0.562 -- 34.07 1036 -- --
59.57 0.362 13.3 0.853 0.581 -- 0.254 -- 0.493 8.04 -- -- -- --
59.75 0.362 13.3 0.86 0.583 -- -- -- 0.493 7.94 -- -- -- --
59.89 0.36 13.2 0.924 -- -0.815 -- -- 0.739 -- -0.009216 1068 -- --
61.71 0.366 13.3 -- 0.631 -0.681 -- -- 0.566 7.65 34.93 20646 -- --
78.26 0.413 13.3 0.866 -- -- -- -- 0.5 -- -- -- -- --
79.23 0.416 13.3 -- 0.589 -- -- -- 0.397 7.84 -- -- -- --
76.78 0.408 13.3 -- -- -0.782 -- -- 0.539 -- 46.01 20711 -- --
98.03 0.462 13.3 -- -- -- -- -- 0.404 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 48.00 temperature 15.0 270 > th dose independent rect. 17 7
2 48.01 precipitation 0.1 43200 < th dose independent rect. 15 2
3 48.01 precipitation 0.1 43200 < th dose dependent rect. 15 2
4 48.04 precipitation 0.1 43200 > th dose independent rect. 15 2
5 48.07 precipitation 0.1 43200 > th dose dependent rect. 15 2
6 48.09 wind 5.0 43200 < th dose dependent rect. 4 1
12 48.20 wind 9.0 43200 < th dose dependent rect. 3 3
19 48.33 wind 1.0 43200 < th dose dependent rect. 3 4
20 48.39 wind 1.0 43200 > th dose dependent rect. 4 1
21 48.40 wind 1.0 43200 > th dose dependent rect. 3 3
30 48.58 precipitation 0.1 43200 < th dose independent rect. 14 6
31 48.58 wind 9.0 43200 > th dose dependent rect. 18 1
32 48.58 precipitation 0.1 43200 < th dose dependent rect. 14 6
33 48.59 temperature 15.0 270 > th dose independent rect. 18 5
36 48.63 wind 1.0 43200 < th dose dependent rect. 1 6
44 48.66 precipitation 0.1 43200 > th dose independent rect. 14 6
47 48.68 precipitation 0.1 43200 < th dose independent rect. 18 2
48 48.68 precipitation 0.1 43200 < th dose dependent rect. 18 2
54 48.71 precipitation 0.1 43200 > th dose independent rect. 11 9
61 48.75 wind 1.0 43200 > th dose independent rect. 3 4
63 48.76 wind 1.0 43200 < th dose independent rect. 1 6
76 48.81 precipitation 0.1 43200 > th dose independent rect. 18 2
86 48.87 wind 1.0 43200 < th dose independent rect. 3 4
90 48.88 radiation 10.0 14400 < th dose dependent rect. 8 1
93 48.91 humidity 90.0 43200 > th dose dependent rect. 9 1
103 48.96 wind 1.0 270 > th dose independent rect. 13 15
113 49.00 wind 1.0 43200 > th dose independent rect. 1 6
124 49.01 precipitation 0.1 43200 < th dose independent rect. 9 8
128 49.01 precipitation 0.1 43200 < th dose dependent rect. 9 8
155 49.08 temperature 15.0 270 > th dose independent rect. 3 22
182 49.17 temperature 15.0 270 > th dose independent rect. 19 14
227 49.26 wind 3.0 14400 > th dose independent rect. 14 1
233 49.27 humidity 90.0 14400 > th dose dependent rect. 1 9
234 49.28 temperature 15.0 270 > th dose independent rect. 5 18
241 49.30 precipitation 0.1 43200 > th dose independent rect. 7 2
242 49.30 precipitation 0.1 43200 > th dose dependent rect. 7 2
266 49.39 precipitation 0.1 43200 > th dose dependent rect. 18 10
270 49.40 radiation 40.0 1440 > th dose dependent rect. 14 20
271 49.41 wind 5.0 14400 < th dose dependent rect. 14 1
272 49.42 precipitation 0.1 43200 < th dose independent sin 21 NA
273 49.42 humidity 70.0 14400 > th dose independent rect. 10 1
274 49.42 precipitation 0.1 43200 > th dose independent rect. 13 15
275 49.42 precipitation 0.1 43200 < th dose independent rect. 13 15
277 49.42 precipitation 0.1 43200 < th dose dependent sin 21 NA
278 49.42 wind 3.0 43200 > th dose dependent rect. 7 1
281 49.42 precipitation 0.1 43200 < th dose dependent rect. 13 15
283 49.43 precipitation 0.1 43200 > th dose independent sin 21 NA
289 49.44 humidity 70.0 14400 > th dose independent rect. 18 2
291 49.44 temperature 15.0 270 > th dose independent rect. 18 17
294 49.45 wind 3.0 14400 < th dose independent rect. 14 1
299 49.45 precipitation 0.1 43200 > th dose dependent rect. 4 9
300 49.45 precipitation 0.1 43200 > th dose dependent rect. 8 12
302 49.46 humidity 70.0 14400 < th dose independent rect. 11 1
313 49.47 wind 9.0 43200 > th dose independent rect. 18 1
315 49.47 humidity 90.0 14400 > th dose dependent rect. 21 7
338 49.51 precipitation 0.1 43200 > th dose independent rect. 4 9
339 49.51 precipitation 0.1 43200 < th dose independent rect. 4 9
343 49.51 precipitation 0.1 43200 > th dose dependent rect. 18 2
345 49.51 precipitation 0.1 43200 < th dose dependent rect. 4 9
373 49.53 humidity 90.0 14400 > th dose dependent rect. 20 10
381 49.54 precipitation 0.1 43200 > th dose dependent rect. 11 17
383 49.55 precipitation 0.1 43200 < th dose independent rect. 7 2
388 49.55 humidity 80.0 14400 < th dose dependent rect. 19 1
389 49.55 precipitation 0.1 43200 < th dose dependent rect. 7 2
393 49.55 precipitation 0.1 43200 > th dose dependent rect. 9 19
437 49.59 humidity 90.0 14400 > th dose dependent sin 9 NA
448 49.60 wind 1.0 43200 < th dose independent rect. 5 1
462 49.61 humidity 90.0 43200 > th dose independent rect. 9 1
470 49.61 humidity 80.0 43200 > th dose dependent rect. 12 1
472 49.61 humidity 90.0 43200 > th dose dependent rect. 8 6
488 49.63 radiation 10.0 14400 < th dose independent rect. 8 1
493 49.63 humidity 80.0 43200 > th dose dependent rect. 10 4
514 49.65 humidity 70.0 14400 > th dose independent rect. 18 6
536 49.66 wind 1.0 270 > th dose independent rect. 1 2
567 49.68 humidity 70.0 14400 < th dose independent rect. 18 2
614 49.70 humidity 90.0 14400 > th dose dependent rect. 24 3
641 49.71 radiation 20.0 14400 > th dose dependent rect. 7 1
702 49.74 radiation 40.0 1440 > th dose independent rect. 13 2
711 49.74 humidity 90.0 43200 > th dose dependent rect. 8 9
719 49.75 radiation 10.0 14400 > th dose independent rect. 8 1
739 49.76 radiation 40.0 1440 < th dose independent rect. 13 2
760 49.76 radiation 30.0 14400 < th dose dependent rect. 7 1
781 49.77 radiation 40.0 14400 > th dose dependent rect. 13 2
791 49.78 radiation 1.0 14400 > th dose dependent rect. 7 1
797 49.79 wind 1.0 270 > th dose independent rect. 24 4
798 49.79 radiation 40.0 1440 < th dose independent rect. 13 12
824 49.80 radiation 40.0 1440 > th dose dependent sin 12 NA
831 49.81 radiation 40.0 1440 < th dose independent rect. 13 4
840 49.81 precipitation 0.1 43200 > th dose dependent rect. 18 4
864 49.81 radiation 40.0 270 < th dose dependent rect. 5 19
867 49.82 temperature 25.0 43200 > th dose independent rect. 11 1
908 49.84 atmosphere 1000.0 270 > th dose independent rect. 5 18
940 49.86 humidity 90.0 43200 > th dose independent rect. 8 6
947 49.86 precipitation 0.1 43200 > th dose dependent rect. 12 2
954 49.87 radiation 40.0 1440 > th dose independent sin 13 NA
956 49.87 temperature 25.0 43200 < th dose independent rect. 10 2
971 49.88 radiation 40.0 1440 < th dose independent rect. 13 19