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Os06g0621800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.4 (0.032) R2 : 0.073
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.404 (0.0675) R2dN8 : 0.0943 R2N8 : 0.073
σ : 0.604
deviance : 167.2
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
136.55 0.544 5.35 -1.91 0.499 124 -0.541 257 0.427 21.1 15 90 -- --
136.65 0.549 6.41 0.315 0.502 2.57 -0.566 -- 0.43 21.1 15 90 -- --
137.56 0.546 5.35 -1.89 0.501 124 -- 257 0.427 21.1 15.01 90 -- --
137.65 0.546 6.41 0.317 0.494 2.44 -- -- 0.426 21 14.76 327 -- --
151.98 0.574 5.24 -2.1 -- 125 -- 258 0.424 -- 15.11 115 -- --
149.17 0.573 6.4 0.423 0.473 -- -0.313 -- 0.456 20.8 -- -- -- --
149.49 0.573 6.4 0.433 0.473 -- -- -- 0.456 20.9 -- -- -- --
151.67 0.574 6.4 0.321 -- 2.28 -- -- 0.423 -- 14.76 327 -- --
140.15 0.551 6.42 -- 0.496 2.61 -- -- 0.388 21.1 14.73 327 -- --
162.24 0.595 6.39 0.433 -- -- -- -- 0.453 -- -- -- -- --
154.44 0.581 6.41 -- 0.472 -- -- -- 0.408 20.9 -- -- -- --
154.25 0.578 6.4 -- -- 2.44 -- -- 0.386 -- 14.77 264 -- --
167.2 0.604 6.4 -- -- -- -- -- 0.404 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 120.43 temperature 15.0 270 > th dose independent rect. 18 8
3 120.91 temperature 15.0 270 > th dose independent rect. 6 20
7 122.71 temperature 15.0 10 > th dose independent rect. 20 9
12 123.89 temperature 15.0 10 > th dose independent rect. 8 21
16 124.51 temperature 15.0 10 > th dose independent rect. 6 23
39 126.45 atmosphere 1010.0 10 < th dose independent rect. 20 9
40 126.54 temperature 15.0 270 > th dose independent rect. 17 22
61 128.04 temperature 15.0 1440 > th dose independent rect. 9 7
63 128.08 atmosphere 1010.0 10 < th dose independent rect. 8 21
64 128.13 temperature 15.0 270 > th dose independent rect. 19 18
72 128.77 atmosphere 1015.0 10 < th dose dependent rect. 20 9
75 129.04 temperature 15.0 270 > th dose independent rect. 20 15
82 129.33 atmosphere 995.0 90 > th dose dependent rect. 15 17
100 129.90 temperature 15.0 10 > th dose independent rect. 9 17
116 130.20 atmosphere 995.0 10 > th dose dependent rect. 16 16
117 130.24 temperature 10.0 90 > th dose dependent rect. 20 8
119 130.30 temperature 10.0 270 > th dose dependent rect. 18 8
142 130.74 temperature 10.0 10 > th dose dependent rect. 20 9
145 130.84 temperature 15.0 1440 > th dose independent rect. 16 5
182 131.91 temperature 15.0 10 > th dose independent rect. 20 19
193 132.10 atmosphere 1010.0 10 < th dose independent rect. 9 17
213 132.42 temperature 30.0 90 < th dose dependent rect. 4 3
214 132.43 wind 1.0 270 > th dose independent rect. 14 16
217 132.46 wind 9.0 90 < th dose independent rect. 8 20
220 132.52 temperature 30.0 270 < th dose dependent rect. 2 4
221 132.53 wind 7.0 270 < th dose independent rect. 6 8
227 132.62 wind 9.0 10 < th dose independent rect. 8 21
246 132.86 radiation 1.0 10 < th dose dependent rect. 20 9
248 132.88 humidity 50.0 270 > th dose independent rect. 6 8
249 132.89 precipitation 0.1 10 < th dose independent rect. 8 21
250 132.89 precipitation 0.1 10 < th dose dependent rect. 8 21
262 132.97 temperature 30.0 10 < th dose independent rect. 20 9
263 132.97 humidity 50.0 10 > th dose independent rect. 20 9
266 132.97 atmosphere 995.0 10 > th dose independent rect. 20 9
267 132.97 radiation 1.0 10 < th dose independent rect. 20 9
272 132.97 temperature 10.0 10 > th dose independent rect. 5 15
274 132.97 atmosphere 1015.0 10 < th dose independent rect. 5 15
284 133.02 radiation 40.0 270 < th dose independent rect. 14 16
290 133.05 temperature 30.0 90 < th dose independent rect. 19 9
291 133.05 humidity 50.0 90 > th dose independent rect. 19 9
293 133.05 atmosphere 995.0 90 > th dose independent rect. 19 9
294 133.05 radiation 1.0 90 < th dose independent rect. 19 9
299 133.05 temperature 10.0 90 > th dose independent rect. 4 15
300 133.05 atmosphere 1015.0 90 < th dose independent rect. 4 15
301 133.05 radiation 1.0 90 < th dose dependent rect. 19 9
307 133.07 precipitation 0.1 10 < th dose independent rect. 5 3
308 133.07 wind 9.0 270 < th dose independent rect. 6 20
309 133.07 precipitation 0.1 90 < th dose independent rect. 8 20
310 133.07 precipitation 0.1 10 < th dose dependent rect. 5 3
311 133.07 precipitation 0.1 90 < th dose dependent rect. 8 20
312 133.08 wind 7.0 10 < th dose independent rect. 5 3
314 133.08 temperature 10.0 10 > th dose independent rect. 5 3
316 133.08 temperature 30.0 10 < th dose independent rect. 5 3
317 133.08 humidity 50.0 10 > th dose independent rect. 5 3
319 133.08 atmosphere 995.0 10 > th dose independent rect. 5 3
320 133.08 atmosphere 1015.0 10 < th dose independent rect. 5 3
323 133.12 wind 9.0 10 < th dose independent rect. 20 9
326 133.15 wind 9.0 10 < th dose dependent rect. 5 3
328 133.16 precipitation 0.1 90 < th dose independent rect. 19 9
329 133.16 precipitation 0.1 10 < th dose independent rect. 20 9
331 133.16 precipitation 0.1 90 < th dose dependent rect. 19 9
332 133.16 precipitation 0.1 10 < th dose dependent rect. 20 9
334 133.18 radiation 1.0 270 > th dose independent rect. 6 8
336 133.20 precipitation 0.1 270 < th dose independent rect. 6 8
337 133.20 humidity 50.0 10 > th dose independent rect. 8 21
338 133.20 precipitation 0.1 270 < th dose dependent rect. 6 8
339 133.23 temperature 15.0 270 > th dose independent rect. 6 8
340 133.23 wind 9.0 90 < th dose independent rect. 19 9
341 133.23 atmosphere 995.0 10 > th dose dependent rect. 5 3
342 133.26 wind 7.0 270 < th dose independent rect. 2 4
344 133.26 atmosphere 995.0 270 > th dose independent rect. 6 8
345 133.26 atmosphere 1015.0 270 < th dose independent rect. 6 8
346 133.26 temperature 10.0 270 > th dose independent rect. 14 16
348 133.28 atmosphere 1010.0 90 < th dose independent rect. 4 4
349 133.29 wind 9.0 90 < th dose dependent rect. 4 4
350 133.30 temperature 30.0 270 < th dose dependent rect. 4 1
351 133.31 wind 7.0 90 < th dose independent rect. 4 4
353 133.31 temperature 10.0 90 > th dose independent rect. 4 4
355 133.31 temperature 30.0 90 < th dose independent rect. 4 4
356 133.31 humidity 50.0 90 > th dose independent rect. 4 4
358 133.31 atmosphere 995.0 90 > th dose independent rect. 4 4
360 133.31 precipitation 0.1 10 < th dose independent rect. 5 15
363 133.31 precipitation 0.1 10 < th dose dependent rect. 5 15
364 133.32 precipitation 0.1 90 < th dose independent rect. 4 4
365 133.32 precipitation 0.1 90 < th dose dependent rect. 4 4
366 133.33 temperature 30.0 10 < th dose dependent rect. 5 3
367 133.34 atmosphere 995.0 10 > th dose independent rect. 8 21
370 133.37 wind 9.0 90 < th dose independent rect. 8 7
371 133.37 precipitation 0.1 270 < th dose independent rect. 6 20
373 133.37 precipitation 0.1 270 < th dose dependent rect. 6 20
379 133.45 radiation 40.0 90 < th dose independent rect. 4 4
385 133.48 temperature 10.0 270 > th dose independent rect. 2 4
387 133.48 temperature 30.0 270 < th dose independent rect. 2 4
388 133.48 humidity 50.0 270 > th dose independent rect. 2 4
391 133.48 atmosphere 995.0 270 > th dose independent rect. 2 4
392 133.48 atmosphere 1015.0 270 < th dose independent rect. 2 4
393 133.48 radiation 20.0 270 < th dose independent rect. 2 4
399 133.51 atmosphere 995.0 90 > th dose dependent rect. 4 4
400 133.51 temperature 10.0 10 > th dose dependent rect. 8 21
405 133.56 precipitation 0.1 270 < th dose independent rect. 2 4
407 133.56 wind 9.0 270 < th dose independent rect. 14 16
408 133.56 precipitation 0.1 270 < th dose dependent rect. 2 4
410 133.58 temperature 15.0 90 > th dose independent rect. 8 7
415 133.60 precipitation 0.1 270 < th dose independent rect. 17 9
416 133.60 precipitation 0.1 270 < th dose dependent rect. 17 9
421 133.66 atmosphere 1005.0 90 > th dose independent rect. 8 7
440 133.67 atmosphere 995.0 90 > th dose independent rect. 8 20
448 133.71 temperature 25.0 270 < th dose independent rect. 4 1
450 133.71 atmosphere 995.0 90 > th dose independent rect. 8 7
452 133.72 precipitation 0.1 90 < th dose independent rect. 8 7
454 133.72 precipitation 0.1 90 < th dose dependent rect. 8 7
456 133.73 atmosphere 1015.0 90 < th dose independent rect. 8 7
460 133.75 precipitation 0.1 90 < th dose independent rect. 4 15
461 133.75 precipitation 0.1 90 < th dose dependent rect. 4 15
462 133.76 radiation 40.0 10 < th dose independent rect. 5 3
464 133.76 radiation 20.0 270 < th dose independent rect. 17 9
467 133.76 temperature 10.0 270 > th dose independent rect. 2 15
468 133.76 atmosphere 1015.0 270 < th dose independent rect. 2 15
474 133.79 precipitation 0.1 270 < th dose independent rect. 14 16
476 133.79 precipitation 0.1 270 < th dose dependent rect. 14 16
477 133.80 radiation 40.0 270 < th dose dependent rect. 2 4
482 133.82 wind 9.0 270 < th dose dependent rect. 2 4
488 133.85 humidity 50.0 90 > th dose independent rect. 8 7
489 133.87 atmosphere 995.0 270 > th dose independent rect. 14 16
504 133.90 wind 9.0 270 < th dose independent rect. 17 9
512 133.92 atmosphere 995.0 270 > th dose dependent rect. 2 4
523 133.98 radiation 40.0 90 < th dose dependent rect. 4 4
532 134.01 temperature 10.0 90 > th dose dependent rect. 8 20
537 134.04 temperature 15.0 10 > th dose independent rect. 18 22
539 134.05 atmosphere 995.0 10 > th dose independent rect. 5 15
543 134.06 atmosphere 1015.0 270 < th dose dependent rect. 21 4
578 134.09 humidity 50.0 270 > th dose dependent rect. 2 4
582 134.10 precipitation 0.1 270 < th dose independent rect. 2 15
587 134.10 precipitation 0.1 270 < th dose dependent rect. 2 15
588 134.11 atmosphere 995.0 90 > th dose independent rect. 4 15
610 134.15 humidity 50.0 270 > th dose independent rect. 14 16
620 134.17 temperature 15.0 10 > th dose independent rect. 23 16
636 134.22 radiation 40.0 10 < th dose dependent rect. 5 3
646 134.30 radiation 1.0 90 > th dose independent rect. 8 7
648 134.30 wind 9.0 10 < th dose independent rect. 5 15
649 134.30 humidity 50.0 90 > th dose dependent rect. 4 4
660 134.34 atmosphere 995.0 270 > th dose independent rect. 2 15
688 134.40 wind 1.0 90 > th dose independent rect. 8 7
692 134.41 atmosphere 1015.0 1440 < th dose independent rect. 24 5
705 134.45 wind 1.0 270 > th dose independent rect. 6 8
709 134.45 atmosphere 995.0 90 > th dose dependent rect. 8 7
719 134.48 humidity 50.0 10 > th dose dependent rect. 5 3
727 134.50 humidity 90.0 90 < th dose independent rect. 8 7
762 134.57 atmosphere 995.0 10 > th dose independent rect. 8 8
774 134.60 radiation 1.0 10 < th dose dependent sin 11 NA
781 134.63 humidity 50.0 10 > th dose independent rect. 8 8
799 134.64 humidity 50.0 90 > th dose independent rect. 8 20
823 134.69 temperature 15.0 10 > th dose independent rect. 12 17
830 134.70 wind 9.0 270 < th dose dependent rect. 6 8
833 134.71 wind 9.0 10 < th dose independent rect. 8 8
858 134.74 wind 9.0 90 < th dose independent rect. 4 15
863 134.75 humidity 50.0 270 > th dose dependent rect. 4 1
871 134.77 temperature 10.0 10 > th dose independent rect. 8 8
873 134.77 atmosphere 1015.0 10 < th dose independent rect. 8 8
874 134.77 precipitation 0.1 10 < th dose independent rect. 8 8
875 134.77 temperature 10.0 10 > th dose independent rect. 16 16
879 134.77 precipitation 0.1 10 < th dose dependent rect. 8 8
896 134.82 radiation 40.0 270 < th dose dependent rect. 4 1
908 134.84 wind 9.0 90 < th dose dependent rect. 8 20
950 134.92 precipitation 0.1 1440 > th dose independent rect. 12 1
954 134.92 precipitation 0.1 1440 > th dose dependent rect. 12 1
960 134.93 wind 9.0 270 < th dose independent rect. 2 15
979 134.97 atmosphere 995.0 10 > th dose independent rect. 16 16
993 135.03 radiation 1.0 10 > th dose independent rect. 8 8