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Os06g0614400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0303) R2 : 0.766
β1 : -1.9 (0.111) R2dD : 0.155 R2D : 0.161
β2 : 2.71 (0.079) R2dC : 0.606 R2C : 0.611
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00695 (0.0647) R2dN8 : 7.93e-06 R2N8 : -0.0029
σ : 0.57
deviance : 148.21
__
_____
C
peak time of C : 18.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
126.41 0.528 12.8 -1.71 2.72 0.673 1.14 -1.23 0.185 18.7 19.57 1345 -- --
129.95 0.531 12.8 -1.76 2.74 0.672 1.23 -- 0.185 18.8 19.51 1335 -- --
129.22 0.529 12.8 -1.72 2.75 0.689 -- -1.44 0.193 18.7 19.5 1281 -- --
133.69 0.539 12.8 -1.77 2.73 0.685 -- -- 0.181 18.7 19.5 1336 -- --
525.29 1.07 12.8 -1.7 -- 0.54 -- -0.996 0.0533 -- 27.84 2909 -- --
144.49 0.564 12.8 -1.88 2.7 -- 1.22 -- 0.00316 18.6 -- -- -- --
148.21 0.57 12.8 -1.9 2.71 -- -- -- 0.00695 18.6 -- -- -- --
514.63 1.06 12.8 -1.71 -- 0.65 -- -- 0.0848 -- 48.87 1398 -- --
213.48 0.68 12.8 -- 2.7 0.801 -- -- 0.405 18.6 11.69 1401 -- --
530.08 1.08 12.8 -1.96 -- -- -- -- -0.0484 -- -- -- -- --
243.06 0.729 12.8 -- 2.73 -- -- -- 0.218 18.5 -- -- -- --
601.2 1.14 12.8 -- -- 1.11 -- -- 0.46 -- 10.04 1440 -- --
631.71 1.17 12.7 -- -- -- -- -- 0.169 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 117.84 temperature 20.0 90 > th dose independent rect. 22 6
3 118.77 temperature 20.0 90 > th dose independent rect. 6 22
4 118.92 temperature 20.0 270 > th dose independent rect. 6 20
6 119.54 temperature 20.0 270 > th dose independent rect. 21 4
7 119.89 temperature 15.0 90 > th dose dependent rect. 21 7
13 120.67 wind 3.0 90 < th dose dependent rect. 4 3
19 121.20 temperature 15.0 270 > th dose dependent rect. 21 4
21 121.38 radiation 1.0 30 > th dose independent rect. 18 12
22 121.50 radiation 1.0 30 > th dose independent rect. 5 1
35 121.61 temperature 15.0 270 > th dose dependent rect. 23 1
51 121.84 temperature 20.0 270 > th dose independent rect. 23 1
75 122.50 humidity 50.0 90 > th dose dependent rect. 7 21
77 122.64 atmosphere 1010.0 90 < th dose independent rect. 4 3
79 122.71 temperature 10.0 90 > th dose dependent rect. 6 22
80 122.77 wind 5.0 90 < th dose independent rect. 4 2
83 122.82 atmosphere 1015.0 90 < th dose independent rect. 6 22
84 122.83 humidity 50.0 10 > th dose dependent rect. 7 22
85 122.84 humidity 80.0 90 > th dose independent rect. 22 6
90 122.92 temperature 10.0 90 > th dose dependent rect. 4 2
91 122.95 wind 5.0 270 < th dose dependent rect. 2 4
101 123.16 precipitation 0.1 90 < th dose independent rect. 4 2
102 123.16 precipitation 0.1 90 < th dose dependent rect. 4 2
105 123.30 humidity 60.0 90 > th dose dependent rect. 21 7
108 123.32 temperature 10.0 90 > th dose independent rect. 4 2
110 123.32 temperature 30.0 90 < th dose independent rect. 4 2
111 123.32 humidity 50.0 90 > th dose independent rect. 4 2
114 123.32 atmosphere 995.0 90 > th dose independent rect. 4 2
117 123.32 radiation 20.0 90 < th dose independent rect. 4 2
120 123.32 temperature 10.0 90 > th dose independent rect. 6 22
128 123.46 atmosphere 1010.0 10 < th dose independent rect. 5 2
133 123.47 wind 9.0 90 < th dose independent rect. 6 22
140 123.60 temperature 10.0 10 > th dose dependent rect. 5 1
152 123.63 wind 3.0 270 < th dose independent rect. 2 4
153 123.65 humidity 50.0 90 > th dose dependent rect. 4 2
174 123.92 radiation 40.0 90 < th dose dependent rect. 4 2
177 123.96 atmosphere 1015.0 10 < th dose independent rect. 6 23
192 124.16 wind 5.0 10 < th dose independent rect. 5 1
195 124.24 wind 7.0 10 < th dose dependent rect. 5 1
197 124.26 radiation 1.0 10 > th dose dependent rect. 18 12
203 124.35 radiation 40.0 1440 < th dose independent rect. 5 3
205 124.37 precipitation 0.1 90 < th dose independent rect. 6 22
207 124.37 precipitation 0.1 90 < th dose dependent rect. 6 22
215 124.43 humidity 50.0 90 > th dose independent rect. 6 22
218 124.44 radiation 1.0 90 > th dose dependent rect. 18 12
224 124.51 precipitation 0.1 10 < th dose independent rect. 5 1
225 124.51 precipitation 0.1 10 < th dose dependent rect. 5 1
228 124.58 atmosphere 1015.0 90 < th dose independent rect. 21 7
244 124.62 radiation 1.0 10 > th dose dependent rect. 5 1
245 124.62 radiation 1.0 90 > th dose dependent rect. 5 1
259 124.64 temperature 10.0 10 > th dose independent rect. 5 1
261 124.64 temperature 30.0 10 < th dose independent rect. 5 1
262 124.64 humidity 50.0 10 > th dose independent rect. 5 1
265 124.64 atmosphere 995.0 10 > th dose independent rect. 5 1
271 124.64 temperature 10.0 10 > th dose independent rect. 6 23
315 124.90 wind 3.0 90 < th dose dependent rect. 4 7
327 124.91 atmosphere 1015.0 90 < th dose dependent rect. 4 3
329 124.92 temperature 10.0 10 > th dose dependent rect. 6 23
372 125.14 atmosphere 995.0 10 > th dose dependent rect. 5 1
375 125.17 precipitation 0.1 270 < th dose independent rect. 2 4
377 125.17 precipitation 0.1 270 < th dose dependent rect. 2 4
378 125.18 wind 3.0 90 < th dose dependent rect. 4 11
379 125.19 wind 1.0 90 < th dose independent rect. 4 17
388 125.24 wind 1.0 90 < th dose independent rect. 4 11
394 125.27 atmosphere 995.0 90 > th dose dependent rect. 4 2
398 125.29 wind 1.0 90 < th dose independent rect. 4 13
406 125.33 atmosphere 1015.0 90 < th dose dependent rect. 21 7
421 125.35 wind 3.0 90 < th dose dependent rect. 4 14
431 125.42 humidity 50.0 10 > th dose independent rect. 6 23
432 125.43 humidity 50.0 10 > th dose dependent rect. 5 2
494 125.73 radiation 40.0 10 < th dose dependent rect. 5 1
500 125.76 wind 9.0 90 < th dose independent rect. 21 7
503 125.76 radiation 1.0 90 < th dose dependent rect. 21 7
504 125.77 temperature 10.0 90 > th dose independent rect. 21 7
505 125.77 temperature 30.0 90 < th dose independent rect. 21 7
506 125.77 humidity 50.0 90 > th dose independent rect. 21 7
509 125.77 atmosphere 995.0 90 > th dose independent rect. 21 7
510 125.77 radiation 1.0 90 < th dose independent rect. 21 7
515 125.77 temperature 10.0 90 > th dose independent rect. 4 17
516 125.77 atmosphere 1015.0 90 < th dose independent rect. 4 17
538 125.88 precipitation 0.1 90 < th dose independent rect. 21 7
542 125.88 precipitation 0.1 90 < th dose dependent rect. 21 7
572 126.00 precipitation 0.1 90 < th dose independent rect. 4 17
573 126.00 humidity 60.0 270 > th dose dependent rect. 21 4
575 126.00 precipitation 0.1 90 < th dose dependent rect. 4 17
576 126.01 wind 9.0 90 < th dose independent rect. 4 17
615 126.06 atmosphere 1015.0 30 < th dose dependent rect. 23 5
617 126.06 temperature 10.0 270 > th dose dependent rect. 6 19
620 126.08 radiation 1.0 10 < th dose independent rect. 23 15
635 126.13 atmosphere 995.0 90 > th dose independent rect. 6 22
651 126.21 wind 1.0 90 < th dose independent rect. 4 7
667 126.30 wind 9.0 90 < th dose dependent rect. 4 17
668 126.31 atmosphere 1015.0 270 < th dose independent rect. 21 4
705 126.42 radiation 1.0 10 < th dose independent rect. 23 13
709 126.43 temperature 10.0 270 > th dose independent rect. 2 4
711 126.43 temperature 30.0 270 < th dose independent rect. 2 4
712 126.43 humidity 50.0 270 > th dose independent rect. 2 4
715 126.43 atmosphere 995.0 270 > th dose independent rect. 2 4
716 126.43 atmosphere 1015.0 270 < th dose independent rect. 2 4
717 126.43 radiation 20.0 270 < th dose independent rect. 2 4
727 126.46 humidity 50.0 270 > th dose independent rect. 6 10
738 126.51 atmosphere 1015.0 270 < th dose independent rect. 23 1
755 126.58 radiation 1.0 10 < th dose independent rect. 23 9
765 126.61 atmosphere 995.0 90 > th dose independent rect. 4 17
791 126.67 radiation 40.0 270 < th dose dependent rect. 2 4
823 126.84 radiation 1.0 30 > th dose independent sin 11 NA
830 126.85 wind 9.0 90 < th dose dependent rect. 21 7
832 126.86 radiation 1.0 10 < th dose dependent rect. 23 15
840 126.90 atmosphere 995.0 270 > th dose independent rect. 16 14
853 126.94 humidity 80.0 1440 < th dose independent rect. 1 11
859 126.95 humidity 90.0 1440 < th dose dependent rect. 2 10
861 126.96 atmosphere 1015.0 270 < th dose dependent rect. 21 4
887 127.01 humidity 80.0 270 > th dose independent rect. 22 3
892 127.02 humidity 60.0 270 > th dose dependent rect. 23 1
896 127.03 precipitation 0.1 270 < th dose independent rect. 1 20
897 127.03 precipitation 0.1 270 < th dose dependent rect. 1 20
898 127.04 radiation 20.0 1440 < th dose independent rect. 24 10
901 127.04 radiation 1.0 30 < th dose dependent sin 11 NA
903 127.04 atmosphere 995.0 10 > th dose dependent rect. 16 15
909 127.07 radiation 20.0 1440 < th dose independent rect. 2 8
915 127.08 humidity 80.0 1440 > th dose independent rect. 1 12
916 127.08 radiation 20.0 1440 < th dose independent rect. 19 15
926 127.10 radiation 20.0 1440 < th dose independent rect. 6 4
937 127.11 humidity 80.0 1440 < th dose dependent rect. 21 14
967 127.16 precipitation 0.1 270 < th dose independent rect. 21 4
971 127.16 precipitation 0.1 270 < th dose dependent rect. 21 4
978 127.19 radiation 20.0 1440 < th dose independent sin 9 NA
979 127.19 radiation 20.0 1440 < th dose independent rect. 8 2
981 127.19 atmosphere 995.0 10 > th dose independent rect. 6 23
985 127.20 radiation 1.0 10 < th dose dependent rect. 23 13
988 127.21 radiation 20.0 1440 < th dose independent rect. 16 18
989 127.21 radiation 20.0 1440 < th dose independent rect. 16 20