Os06g0614000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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Os06g0614000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.86 | 0.393 | 9.9 | 1.32 | 2.07 | -0.891 | 0.449 | -0.215 | 0.261 | 6.14 | 22.72 | 25 | -- | -- |
| 70.01 | 0.39 | 9.9 | 1.33 | 2.07 | -0.888 | 0.471 | -- | 0.265 | 6.16 | 23.01 | 22 | -- | -- |
| 70.25 | 0.39 | 9.9 | 1.32 | 2.07 | -0.891 | -- | -0.251 | 0.264 | 6.14 | 23.2 | 22 | -- | -- |
| 70.55 | 0.391 | 9.9 | 1.33 | 2.07 | -0.901 | -- | -- | 0.263 | 6.12 | 23.04 | 22 | -- | -- |
| 273.33 | 0.774 | 9.93 | 1.42 | -- | -0.925 | -- | -0.175 | 0.331 | -- | 8.13 | 13 | -- | -- |
| 83.48 | 0.428 | 9.87 | 1.35 | 2.25 | -- | 0.6 | -- | 0.312 | 7.68 | -- | -- | -- | -- |
| 84.5 | 0.43 | 9.87 | 1.36 | 2.26 | -- | -- | -- | 0.311 | 7.67 | -- | -- | -- | -- |
| 273.51 | 0.774 | 9.93 | 1.42 | -- | -0.926 | -- | -- | 0.332 | -- | 8.13 | 13 | -- | -- |
| 116.97 | 0.504 | 9.94 | -- | 2.1 | -0.962 | -- | -- | 0.117 | 6 | 23.27 | 19 | -- | -- |
| 358.36 | 0.885 | 9.93 | 1.39 | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
| 133.34 | 0.54 | 9.91 | -- | 2.27 | -- | -- | -- | 0.16 | 7.63 | -- | -- | -- | -- |
| 326.08 | 0.844 | 9.97 | -- | -- | -0.903 | -- | -- | 0.168 | -- | 7.1 | 8 | -- | -- |
| 409.43 | 0.944 | 9.96 | -- | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.03 | humidity | 80.0 | 10 | < th | dose independent | rect. | 8 | 8 |
| 9 | 67.23 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 16 | 67.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 24 | 68.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 21 |
| 25 | 68.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 21 |
| 28 | 68.20 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 41 | 68.23 | radiation | 10.0 | 30 | < th | dose dependent | sin | 23 | NA |
| 43 | 68.37 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 56 | 68.58 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 57 | 68.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 23 |
| 59 | 68.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 69 | 68.76 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 70 | 68.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 19 |
| 71 | 68.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 19 |
| 76 | 68.81 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 14 |
| 77 | 68.83 | wind | 3.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 89 | 68.98 | wind | 3.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 97 | 69.08 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 6 | 10 |
| 98 | 69.11 | radiation | 10.0 | 30 | > th | dose independent | sin | 23 | NA |
| 100 | 69.14 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 16 | 18 |
| 115 | 69.17 | humidity | 80.0 | 30 | < th | dose independent | rect. | 22 | 18 |
| 129 | 69.30 | humidity | 70.0 | 10 | > th | dose dependent | sin | 1 | NA |
| 139 | 69.39 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 24 | 21 |
| 140 | 69.41 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 146 | 69.45 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 13 | 8 |
| 150 | 69.48 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 12 | 22 |
| 157 | 69.53 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 8 | 8 |
| 158 | 69.55 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 165 | 69.60 | wind | 7.0 | 10 | < th | dose independent | rect. | 21 | 19 |
| 177 | 69.66 | wind | 3.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 186 | 69.69 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 4 | 12 |
| 189 | 69.70 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 192 | 69.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 194 | 69.72 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 198 | 69.73 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 21 | 19 |
| 210 | 69.80 | radiation | 10.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 217 | 69.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 236 | 69.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 237 | 69.90 | radiation | 10.0 | 30 | > th | dose independent | rect. | 6 | 10 |
| 253 | 69.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 259 | 69.95 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 271 | 69.98 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 294 | 70.00 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 298 | 70.02 | wind | 7.0 | 90 | < th | dose independent | rect. | 20 | 20 |
| 300 | 70.03 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 17 | 2 |
| 302 | 70.04 | wind | 7.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 304 | 70.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 306 | 70.05 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 308 | 70.05 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 8 |
| 309 | 70.05 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 21 | 19 |
| 314 | 70.05 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 21 | 19 |
| 316 | 70.07 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 318 | 70.07 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 322 | 70.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 345 | 70.18 | radiation | 10.0 | 10 | < th | dose independent | rect. | 13 | 8 |
| 365 | 70.23 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 367 | 70.23 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 369 | 70.23 | radiation | 20.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 400 | 70.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 3 |
| 401 | 70.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 427 | 70.35 | radiation | 20.0 | 30 | < th | dose independent | rect. | 24 | 21 |
| 431 | 70.36 | wind | 9.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 433 | 70.37 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 7 |
| 435 | 70.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 444 | 70.41 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 463 | 70.45 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 467 | 70.46 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 468 | 70.46 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 16 | 22 |
| 469 | 70.47 | wind | 1.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 471 | 70.48 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 481 | 70.50 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 492 | 70.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 5 |
| 494 | 70.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 496 | 70.53 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 513 | 70.56 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 2 |
| 514 | 70.57 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 565 | 70.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 569 | 70.67 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 571 | 70.67 | radiation | 20.0 | 30 | < th | dose dependent | no | NA | NA |
| 581 | 70.69 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 584 | 70.70 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 585 | 70.70 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 5 |
| 588 | 70.70 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 5 |
| 597 | 70.72 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 618 | 70.77 | radiation | 30.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 628 | 70.80 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 630 | 70.80 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 635 | 70.80 | temperature | 10.0 | 10 | > th | dose independent | rect. | 21 | 19 |
| 652 | 70.82 | wind | 1.0 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 653 | 70.82 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 16 | 5 |
| 654 | 70.82 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 659 | 70.83 | radiation | 20.0 | 90 | < th | dose independent | rect. | 16 | 18 |
| 677 | 70.86 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 2 |
| 679 | 70.86 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 681 | 70.86 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 744 | 70.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 762 | 70.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 786 | 71.01 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 797 | 71.03 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 810 | 71.04 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 844 | 71.11 | radiation | 10.0 | 30 | > th | dose independent | no | NA | NA |
| 943 | 71.14 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 994 | 71.20 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 5 |