Os06g0613600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0613600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 428.58 | 0.973 | 3.07 | -0.527 | 0.355 | 0.617 | 0.459 | -4.68 | 0.0217 | 0.0166 | 20.21 | 15 | 1.02 | 5.05 |
| 465.73 | 1.01 | 3.03 | -0.0771 | 0.00113 | 0.628 | 2.28 | -- | 0.0791 | 17.6 | 20 | 5 | 1.04 | 4.97 |
| 429.34 | 0.972 | 3.07 | -0.532 | 0.366 | 0.586 | -- | -4.55 | 0.0195 | 0.621 | 20.28 | 13 | 1.19 | 5.36 |
| 470.54 | 1.01 | 3.03 | -0.0899 | 0.373 | 0.476 | -- | -- | 0.0786 | 0.534 | 20.5 | 14 | 1.15 | 5.3 |
| 436.35 | 0.973 | 3.06 | -0.54 | -- | 0.707 | -- | -4.64 | 0.0269 | -- | 20.54 | 14 | 1.18 | 5.33 |
| 475.6 | 1.02 | 3.03 | -0.0909 | 0.602 | -- | -1.39 | -- | 0.054 | 3.34 | -- | -- | -- | -- |
| 480.12 | 1.03 | 3.03 | -0.0648 | 0.603 | -- | -- | -- | 0.0632 | 2.26 | -- | -- | -- | -- |
| 478.25 | 1.02 | 3.02 | -0.0785 | -- | 0.6 | -- | -- | 0.0981 | -- | 20.52 | 14 | 1.09 | 5.47 |
| 470.73 | 1.01 | 3.03 | -- | 0.369 | 0.482 | -- | -- | 0.0896 | 0.377 | 20.53 | 14 | 1.16 | 5.3 |
| 501.76 | 1.05 | 3.03 | -0.0394 | -- | -- | -- | -- | 0.0779 | -- | -- | -- | -- | -- |
| 480.23 | 1.03 | 3.03 | -- | 0.602 | -- | -- | -- | 0.0704 | 2.26 | -- | -- | -- | -- |
| 478.42 | 1.02 | 3.02 | -- | -- | 0.597 | -- | -- | 0.0969 | -- | 20.52 | 14 | 1.09 | 5.48 |
| 501.8 | 1.05 | 3.03 | -- | -- | -- | -- | -- | 0.0822 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 430.08 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 2 | 431.19 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 3 | 431.65 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 5 | 432.50 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 7 | 433.81 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 8 | 434.93 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 10 | 435.29 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 11 | 435.55 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 17 | 436.55 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 18 | 436.57 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 34 | 439.27 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 14 |
| 36 | 439.48 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 6 |
| 40 | 439.50 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 6 |
| 53 | 439.93 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 71 | 440.81 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 7 |
| 72 | 440.87 | wind | 7.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 75 | 440.88 | precipitation | 0.1 | 90 | < th | dose independent | sin | 5 | NA |
| 76 | 440.88 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 5 | NA |
| 79 | 441.08 | wind | 9.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 83 | 441.16 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 5 |
| 96 | 441.50 | wind | 7.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 107 | 441.79 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 110 | 441.83 | wind | 9.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 115 | 442.01 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 18 |
| 144 | 443.01 | wind | 9.0 | 720 | > th | dose independent | rect. | 18 | 8 |
| 152 | 443.02 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 9 |
| 155 | 443.03 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 9 |
| 167 | 443.21 | precipitation | 0.1 | 90 | > th | dose independent | sin | 6 | NA |
| 169 | 443.22 | wind | 9.0 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 191 | 443.29 | precipitation | 0.1 | 30 | < th | dose independent | sin | 2 | NA |
| 192 | 443.29 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 2 | NA |
| 194 | 443.39 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 5 |
| 196 | 443.39 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 5 |
| 199 | 443.48 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 6 | NA |
| 203 | 443.56 | wind | 9.0 | 720 | > th | dose independent | rect. | 18 | 5 |
| 213 | 443.67 | wind | 9.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 229 | 443.86 | wind | 9.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 253 | 443.86 | wind | 9.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 279 | 443.97 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 312 | 444.34 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 390 | 445.04 | wind | 5.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 398 | 445.20 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 407 | 445.33 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 417 | 445.38 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 418 | 445.38 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 7 |
| 490 | 446.05 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 507 | 446.19 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 511 | 446.20 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 588 | 446.42 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 602 | 446.48 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 645 | 446.79 | radiation | 10.0 | 1440 | < th | dose independent | sin | 20 | NA |
| 652 | 446.88 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 682 | 447.10 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 5 |
| 687 | 447.14 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 693 | 447.17 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 782 | 447.46 | wind | 7.0 | 720 | < th | dose independent | rect. | 19 | 9 |
| 787 | 447.50 | wind | 1.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 795 | 447.55 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 803 | 447.62 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 890 | 447.95 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 17 | 22 |
| 905 | 447.99 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 906 | 447.99 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 963 | 448.19 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 975 | 448.33 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 12 | 3 |