Os06g0612500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0612500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.36 | 0.444 | 3.2 | 0.549 | 0.153 | 0.369 | -0.0427 | -0.955 | 0.303 | 8.26 | 23.57 | 4768 | -- | -- |
| 90.18 | 0.442 | 3.23 | 0.352 | 0.135 | 0.491 | 0.0146 | -- | 0.268 | 9.12 | 21.7 | 3904 | -- | -- |
| 89.36 | 0.44 | 3.2 | 0.545 | 0.154 | 0.367 | -- | -0.947 | 0.301 | 8.35 | 23.55 | 4768 | -- | -- |
| 89.95 | 0.442 | 3.24 | 0.295 | 0.149 | 0.424 | -- | -- | 0.238 | 8.12 | 21.67 | 3899 | -- | -- |
| 90.45 | 0.443 | 3.21 | 0.518 | -- | 0.396 | -- | -0.787 | 0.335 | -- | 23.6 | 3068 | -- | -- |
| 94.72 | 0.456 | 3.27 | 0.0457 | 0.158 | -- | -0.00555 | -- | 0.0893 | 8.68 | -- | -- | -- | -- |
| 94.72 | 0.456 | 3.27 | 0.0456 | 0.158 | -- | -- | -- | 0.0893 | 8.69 | -- | -- | -- | -- |
| 91.11 | 0.445 | 3.24 | 0.289 | -- | 0.427 | -- | -- | 0.242 | -- | 21.7 | 3623 | -- | -- |
| 90.82 | 0.444 | 3.24 | -- | 0.158 | 0.328 | -- | -- | 0.214 | 7.73 | 23.3 | 2869 | -- | -- |
| 96.14 | 0.458 | 3.27 | 0.0459 | -- | -- | -- | -- | 0.0906 | -- | -- | -- | -- | -- |
| 94.77 | 0.455 | 3.27 | -- | 0.159 | -- | -- | -- | 0.0842 | 8.67 | -- | -- | -- | -- |
| 91.9 | 0.446 | 3.25 | -- | -- | 0.314 | -- | -- | 0.21 | -- | 23.3 | 2313 | -- | -- |
| 96.19 | 0.458 | 3.28 | -- | -- | -- | -- | -- | 0.0855 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.41 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 87.77 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 3 | 87.78 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 8 | 87.88 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 12 | 87.91 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 14 | 87.91 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 20 | 87.91 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 44 | 87.95 | humidity | 80 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 47 | 87.96 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 145 | 88.02 | temperature | 30 | 14400 | > th | dose independent | sin | 15 | NA |
| 147 | 88.02 | temperature | 30 | 14400 | < th | dose independent | sin | 15 | NA |
| 196 | 88.06 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 197 | 88.06 | humidity | 70 | 43200 | > th | dose dependent | rect. | 8 | 5 |
| 201 | 88.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 203 | 88.08 | humidity | 80 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 222 | 88.09 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 248 | 88.12 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 249 | 88.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 255 | 88.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 256 | 88.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 292 | 88.15 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 329 | 88.17 | humidity | 70 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 348 | 88.18 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 365 | 88.20 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 386 | 88.20 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 22 |
| 475 | 88.22 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 617 | 88.31 | humidity | 80 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 637 | 88.37 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 14 |
| 643 | 88.38 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 10 |
| 659 | 88.39 | temperature | 25 | 14400 | > th | dose dependent | sin | 14 | NA |
| 740 | 88.42 | temperature | 25 | 14400 | > th | dose dependent | rect. | 19 | 22 |
| 743 | 88.43 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 744 | 88.43 | humidity | 70 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 761 | 88.44 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 21 |
| 784 | 88.45 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 17 |
| 809 | 88.46 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 15 |
| 825 | 88.47 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 827 | 88.47 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 828 | 88.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 853 | 88.47 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 19 |
| 862 | 88.47 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 21 |
| 886 | 88.47 | temperature | 25 | 14400 | > th | dose dependent | rect. | 22 | 23 |
| 897 | 88.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 923 | 88.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 926 | 88.49 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 956 | 88.50 | temperature | 25 | 14400 | > th | dose dependent | rect. | 1 | 16 |
| 977 | 88.51 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 995 | 88.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |