Os06g0610500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Seven transmembrane protein Mlo7.
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Os06g0610500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Seven transmembrane protein Mlo7.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.64 | 0.537 | 5.87 | -0.485 | 0.636 | 1.01 | -0.692 | 2.45 | 0.229 | 21.7 | 40.28 | 161 | -- | -- |
| 133.63 | 0.538 | 5.86 | -0.548 | 0.521 | 0.649 | -1.03 | -- | 0.207 | 21 | 41.72 | 1596 | -- | -- |
| 132.23 | 0.536 | 5.87 | -0.464 | 0.636 | 1.03 | -- | 2.87 | 0.227 | 21.8 | 40.02 | 159 | -- | -- |
| 137.31 | 0.546 | 5.86 | -0.53 | 0.533 | 0.697 | -- | -- | 0.202 | 20.9 | 41.64 | 1603 | -- | -- |
| 153.61 | 0.577 | 5.86 | -0.482 | -- | 0.633 | -- | 3.09 | 0.233 | -- | 45.79 | 200 | -- | -- |
| 141.59 | 0.558 | 5.85 | -0.531 | 0.539 | -- | -1 | -- | 0.257 | 20.8 | -- | -- | -- | -- |
| 144.94 | 0.564 | 5.85 | -0.497 | 0.543 | -- | -- | -- | 0.257 | 20.7 | -- | -- | -- | -- |
| 143.52 | 0.558 | 5.87 | -0.532 | -- | 0.843 | -- | -- | 0.114 | -- | -34.94 | 2299 | -- | -- |
| 140.4 | 0.552 | 5.88 | -- | 0.478 | 0.731 | -- | -- | 0.141 | 20.7 | 39.99 | 7992 | -- | -- |
| 161.61 | 0.594 | 5.84 | -0.498 | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
| 151.45 | 0.576 | 5.84 | -- | 0.544 | -- | -- | -- | 0.313 | 20.6 | -- | -- | -- | -- |
| 150.84 | 0.572 | 5.85 | -- | -- | 0.808 | -- | -- | 0.173 | -- | -89.73 | 2358 | -- | -- |
| 168.16 | 0.605 | 5.82 | -- | -- | -- | -- | -- | 0.308 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.48 | radiation | 1e+00 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 2 | 124.08 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 5 | 124.10 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 8 | 124.13 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 10 | 124.13 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 20 | 124.17 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 61 | 124.32 | radiation | 1e+00 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 75 | 124.34 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 152 | 124.44 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 207 | 124.49 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 209 | 124.49 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 234 | 124.51 | atmosphere | 1e+03 | 43200 | < th | dose dependent | sin | 12 | NA |
| 242 | 124.52 | atmosphere | 1e+03 | 43200 | < th | dose independent | sin | 11 | NA |
| 257 | 124.53 | atmosphere | 1e+03 | 43200 | > th | dose independent | sin | 11 | NA |
| 518 | 124.70 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 530 | 124.71 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 595 | 124.74 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 18 | 22 |
| 640 | 124.76 | atmosphere | 1e+03 | 43200 | < th | dose dependent | no | NA | NA |
| 652 | 124.76 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 665 | 124.77 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 675 | 124.77 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 907 | 124.87 | atmosphere | 1e+03 | 43200 | < th | dose independent | no | NA | NA |
| 933 | 124.87 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 947 | 124.88 | atmosphere | 1e+03 | 43200 | > th | dose independent | no | NA | NA |
| 954 | 124.88 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 5 | 22 |
| 961 | 124.88 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 986 | 124.89 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 7 | 20 |