Os06g0610300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0610300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 270.89 | 0.773 | 4.64 | -1.07 | 0.0195 | -2.26 | -1.21 | -2.15 | -0.0122 | 3.49 | 23.37 | 792 | -- | -- |
| 275.61 | 0.773 | 4.67 | -1.33 | 0.143 | -1.95 | 1.16 | -- | -0.0515 | 18 | 23.35 | 826 | -- | -- |
| 272.91 | 0.769 | 4.64 | -1.08 | 0.211 | -2.13 | -- | -1.84 | -0.00716 | 21.5 | 23.25 | 842 | -- | -- |
| 277.15 | 0.775 | 4.67 | -1.33 | 0.233 | -1.87 | -- | -- | -0.0389 | 21.3 | 23.26 | 827 | -- | -- |
| 275.33 | 0.773 | 4.64 | -1.07 | -- | -2.21 | -- | -1.92 | -0.00318 | -- | 23.23 | 820 | -- | -- |
| 322.61 | 0.842 | 4.61 | -0.821 | 0.43 | -- | -0.0306 | -- | 0.276 | 22.1 | -- | -- | -- | -- |
| 322.61 | 0.841 | 4.61 | -0.82 | 0.43 | -- | -- | -- | 0.276 | 22.1 | -- | -- | -- | -- |
| 280 | 0.779 | 4.67 | -1.35 | -- | -1.96 | -- | -- | -0.0604 | -- | 23.4 | 790 | -- | -- |
| 317.21 | 0.83 | 4.62 | -- | 0.289 | -1.23 | -- | -- | 0.19 | 21.6 | 23.5 | 756 | -- | -- |
| 333.81 | 0.854 | 4.6 | -0.814 | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
| 340.32 | 0.863 | 4.59 | -- | 0.427 | -- | -- | -- | 0.368 | 22 | -- | -- | -- | -- |
| 321.9 | 0.836 | 4.62 | -- | -- | -1.34 | -- | -- | 0.169 | -- | 23.6 | 762 | -- | -- |
| 351.29 | 0.875 | 4.58 | -- | -- | -- | -- | -- | 0.367 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 241.48 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 2 | 242.34 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 4 | 244.22 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 7 | 245.08 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 18 | 246.78 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 21 | 247.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 49 | 249.11 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 58 | 250.08 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 60 | 250.20 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 66 | 250.80 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 80 | 252.25 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 81 | 252.50 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 88 | 252.82 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 93 | 253.24 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 95 | 253.31 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 107 | 253.69 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 115 | 254.07 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 118 | 254.16 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 125 | 254.33 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 138 | 255.15 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 148 | 255.38 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 154 | 255.55 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 155 | 255.57 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 158 | 255.60 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 185 | 256.37 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 213 | 257.16 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 214 | 257.20 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 216 | 257.30 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 226 | 257.62 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 350 | 260.78 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 356 | 261.01 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 366 | 261.15 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 376 | 261.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 382 | 261.56 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 385 | 261.57 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 402 | 261.89 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 406 | 261.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 408 | 261.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 412 | 262.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 413 | 262.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 443 | 262.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 445 | 262.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 465 | 263.16 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 484 | 263.46 | wind | 9.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 533 | 264.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 585 | 264.96 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 6 |
| 618 | 265.25 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 642 | 265.48 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 676 | 265.89 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 689 | 266.06 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 8 |
| 693 | 266.15 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 701 | 266.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 702 | 266.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 706 | 266.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 716 | 266.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 721 | 266.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 733 | 266.70 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 790 | 267.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 801 | 267.46 | wind | 5.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 812 | 267.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 814 | 267.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 834 | 267.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 835 | 267.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 837 | 267.78 | wind | 1.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 843 | 267.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 845 | 267.84 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 914 | 268.50 | wind | 9.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 961 | 268.95 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 988 | 269.22 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 997 | 269.31 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |