Os06g0610000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0610000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.34 | 0.439 | 8.15 | -0.313 | 1.74 | 0.94 | -1.45 | -0.0882 | 0.253 | 10.6 | 19.92 | 126 | -- | -- |
| 87.23 | 0.435 | 8.15 | -0.304 | 1.73 | 0.96 | -1.41 | -- | 0.262 | 10.6 | 19.7 | 143 | -- | -- |
| 91.2 | 0.445 | 8.15 | -0.282 | 1.74 | 0.983 | -- | 0.963 | 0.265 | 10.6 | 21.02 | 120 | -- | -- |
| 94.1 | 0.452 | 8.15 | -0.292 | 1.73 | 0.949 | -- | -- | 0.269 | 10.5 | 20.43 | 122 | -- | -- |
| 133.66 | 0.538 | 8.2 | -0.39 | -- | 1.8 | -- | 0.15 | 0.538 | -- | 2.15 | 1062 | -- | -- |
| 112.48 | 0.497 | 8.17 | -0.353 | 1.28 | -- | -1.41 | -- | 0.192 | 9.35 | -- | -- | -- | -- |
| 119.66 | 0.512 | 8.17 | -0.406 | 1.29 | -- | -- | -- | 0.189 | 9.25 | -- | -- | -- | -- |
| 126.84 | 0.525 | 8.17 | -0.253 | -- | 1.94 | -- | -- | 0.352 | -- | 3.82 | 1032 | -- | -- |
| 96.14 | 0.457 | 8.14 | -- | 1.75 | 0.986 | -- | -- | 0.303 | 10.6 | 20.12 | 122 | -- | -- |
| 216.44 | 0.687 | 8.21 | -0.412 | -- | -- | -- | -- | 0.195 | -- | -- | -- | -- | -- |
| 124.01 | 0.521 | 8.16 | -- | 1.29 | -- | -- | -- | 0.234 | 9.27 | -- | -- | -- | -- |
| 129.57 | 0.53 | 8.17 | -- | -- | 1.96 | -- | -- | 0.374 | -- | 3.68 | 1034 | -- | -- |
| 220.9 | 0.694 | 8.2 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.83 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 3 | 80.05 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 5 | 80.80 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 15 | 82.18 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 20 | 9 |
| 32 | 83.05 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 36 | 83.16 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 23 |
| 45 | 83.41 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 55 | 83.73 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 58 | 83.79 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 67 | 84.18 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 69 | 84.21 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 70 | 84.22 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 79 | 84.27 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 82 | 84.32 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 85 | 84.37 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 93 | 84.49 | wind | 9.0 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 99 | 84.58 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 20 |
| 136 | 84.96 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 22 |
| 151 | 85.18 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 161 | 85.41 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 5 |
| 162 | 85.43 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 9 |
| 166 | 85.50 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 15 |
| 172 | 85.57 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 182 | 85.66 | radiation | 1.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 183 | 85.70 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 186 | 85.74 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 190 | 85.80 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 191 | 85.84 | wind | 7.0 | 30 | < th | dose independent | rect. | 20 | 9 |
| 197 | 85.90 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 9 |
| 198 | 85.90 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 9 |
| 208 | 86.01 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 209 | 86.01 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 210 | 86.01 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 213 | 86.01 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 214 | 86.01 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 219 | 86.01 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 221 | 86.01 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 222 | 86.01 | radiation | 20.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 225 | 86.02 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 270 | 86.22 | radiation | 10.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 272 | 86.22 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 15 |
| 275 | 86.22 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 301 | 86.36 | radiation | 1.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 402 | 86.79 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 445 | 87.00 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 15 |
| 509 | 87.24 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 530 | 87.33 | radiation | 30.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 533 | 87.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 23 |
| 559 | 87.40 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 5 |
| 561 | 87.40 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 5 |
| 592 | 87.55 | radiation | 1.0 | 90 | > th | dose dependent | sin | 22 | NA |
| 672 | 87.73 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 673 | 87.74 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 772 | 88.04 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 773 | 88.04 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 21 |
| 781 | 88.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 840 | 88.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 1 |
| 841 | 88.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 846 | 88.28 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 849 | 88.28 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 858 | 88.32 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 860 | 88.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 862 | 88.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 863 | 88.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 866 | 88.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 867 | 88.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 868 | 88.32 | radiation | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 872 | 88.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 874 | 88.33 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 894 | 88.39 | radiation | 20.0 | 90 | < th | dose independent | rect. | 17 | 18 |
| 895 | 88.40 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 15 |
| 897 | 88.42 | wind | 7.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 908 | 88.46 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 910 | 88.46 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 911 | 88.46 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 913 | 88.46 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 914 | 88.46 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 915 | 88.46 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 3 |
| 916 | 88.46 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 917 | 88.46 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 921 | 88.47 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 21 |
| 924 | 88.47 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 21 |
| 944 | 88.50 | radiation | 20.0 | 270 | < th | dose independent | sin | 4 | NA |
| 951 | 88.52 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 953 | 88.53 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 967 | 88.60 | radiation | 10.0 | 270 | > th | dose independent | sin | 3 | NA |