Os06g0609600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0609600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : EF-Hand type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.51 | 0.242 | 12.5 | -0.439 | 0.552 | 0.477 | 0.464 | -2.09 | -0.104 | 24 | 16.04 | 617 | -- | -- |
| 29.24 | 0.252 | 12.4 | -0.0961 | 0.582 | 0.417 | 0.191 | -- | -0.0111 | 23.5 | 14 | 2010 | -- | -- |
| 27 | 0.242 | 12.5 | -0.451 | 0.595 | 0.481 | -- | -2.17 | -0.103 | 0.0812 | 16.25 | 421 | -- | -- |
| 29.4 | 0.253 | 12.4 | -0.103 | 0.579 | 0.417 | -- | -- | -0.0118 | 23.4 | 13.78 | 2026 | -- | -- |
| 43.19 | 0.306 | 12.5 | -0.517 | -- | 0.759 | -- | -1.71 | -0.143 | -- | 16.68 | 855 | -- | -- |
| 32.26 | 0.266 | 12.4 | 0.047 | 0.613 | -- | 0.2 | -- | 0.0686 | 23.3 | -- | -- | -- | -- |
| 32.42 | 0.267 | 12.4 | 0.0391 | 0.612 | -- | -- | -- | 0.068 | 23.3 | -- | -- | -- | -- |
| 45.09 | 0.313 | 12.4 | -0.168 | -- | 0.816 | -- | -- | -0.0546 | -- | 14.56 | 872 | -- | -- |
| 29.64 | 0.254 | 12.4 | -- | 0.584 | 0.373 | -- | -- | 0.00634 | 23.4 | 13.31 | 2005 | -- | -- |
| 55.89 | 0.349 | 12.4 | 0.0545 | -- | -- | -- | -- | 0.0738 | -- | -- | -- | -- | -- |
| 32.46 | 0.267 | 12.4 | -- | 0.613 | -- | -- | -- | 0.0637 | 23.3 | -- | -- | -- | -- |
| 45.76 | 0.315 | 12.4 | -- | -- | 0.743 | -- | -- | -0.0291 | -- | 14.93 | 871 | -- | -- |
| 55.97 | 0.349 | 12.4 | -- | -- | -- | -- | -- | 0.0678 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 24.86 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 3 | 24.97 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 4 | 25.12 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 13 |
| 11 | 25.18 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 12 | 25.21 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 19 | 25.23 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 23 | 25.26 | humidity | 90 | 14400 | > th | dose dependent | sin | 11 | NA |
| 38 | 25.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 12 |
| 61 | 25.36 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 67 | 25.37 | humidity | 60 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 85 | 25.40 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 86 | 25.40 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 125 | 25.47 | radiation | 30 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 140 | 25.50 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 146 | 25.52 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 179 | 25.59 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 191 | 25.62 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 223 | 25.65 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 20 |
| 231 | 25.67 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 12 |
| 294 | 25.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 306 | 25.73 | radiation | 20 | 43200 | > th | dose independent | sin | 8 | NA |
| 321 | 25.73 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 329 | 25.74 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 332 | 25.74 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 341 | 25.75 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 357 | 25.75 | radiation | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 369 | 25.76 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 370 | 25.76 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 378 | 25.77 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 392 | 25.78 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 408 | 25.79 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 14 |
| 431 | 25.80 | radiation | 40 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 437 | 25.81 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 449 | 25.81 | humidity | 60 | 43200 | < th | dose dependent | sin | 2 | NA |
| 455 | 25.81 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 458 | 25.81 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 485 | 25.82 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 513 | 25.83 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 22 |
| 545 | 25.85 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 566 | 25.85 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 579 | 25.86 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 625 | 25.88 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 630 | 25.88 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 20 |
| 643 | 25.89 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 646 | 25.89 | radiation | 40 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 655 | 25.89 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 18 |
| 671 | 25.89 | humidity | 60 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 675 | 25.90 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 678 | 25.90 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 744 | 25.92 | radiation | 40 | 43200 | > th | dose independent | sin | 21 | NA |
| 747 | 25.92 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 748 | 25.92 | radiation | 10 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 801 | 25.94 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 841 | 25.96 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 989 | 25.97 | radiation | 10 | 43200 | > th | dose independent | rect. | 6 | 1 |