Os06g0608700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13).
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Os06g0608700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.75 | 0.321 | 16.1 | -0.119 | 0.498 | 0.416 | 0.207 | 0.647 | -0.286 | 0.00319 | 71 | 272 | -- | -- |
| 47.67 | 0.322 | 16.1 | -0.0747 | 0.497 | 0.424 | 0.413 | -- | -0.272 | 0.0979 | 71 | 267 | -- | -- |
| 46.77 | 0.319 | 16.1 | -0.136 | 0.526 | 0.44 | -- | 0.814 | -0.291 | 23.8 | 71.01 | 321 | -- | -- |
| 48.37 | 0.324 | 16.1 | -0.0781 | 0.51 | 0.475 | -- | -- | -0.273 | 23.6 | 71.03 | 312 | -- | -- |
| 56.09 | 0.349 | 16.1 | -0.118 | -- | 0.565 | -- | 0.691 | -0.299 | -- | 72.18 | 108 | -- | -- |
| 52.85 | 0.341 | 16.1 | -0.114 | 0.709 | -- | 0.636 | -- | -0.3 | 1.72 | -- | -- | -- | -- |
| 54.42 | 0.345 | 16.1 | -0.134 | 0.708 | -- | -- | -- | -0.303 | 1.59 | -- | -- | -- | -- |
| 58.02 | 0.355 | 16.1 | -0.0851 | -- | 0.557 | -- | -- | -0.288 | -- | 73.25 | 124 | -- | -- |
| 48.53 | 0.324 | 16.1 | -- | 0.506 | 0.489 | -- | -- | -0.262 | 23.6 | 71.25 | 312 | -- | -- |
| 85.02 | 0.431 | 16.1 | -0.106 | -- | -- | -- | -- | -0.287 | -- | -- | -- | -- | -- |
| 54.89 | 0.347 | 16.1 | -- | 0.705 | -- | -- | -- | -0.288 | 1.59 | -- | -- | -- | -- |
| 58.21 | 0.355 | 16.1 | -- | -- | 0.558 | -- | -- | -0.279 | -- | 73.37 | 124 | -- | -- |
| 85.32 | 0.431 | 16.1 | -- | -- | -- | -- | -- | -0.276 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.77 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 2 | 40.80 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 12 |
| 5 | 40.90 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 17 |
| 12 | 41.12 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 13 | 41.13 | radiation | 1.0 | 30 | < th | dose dependent | sin | 15 | NA |
| 15 | 41.14 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 16 | 41.22 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 17 | 41.23 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 22 | 41.32 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 13 | 17 |
| 26 | 41.39 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 53 | 41.72 | radiation | 1.0 | 90 | < th | dose independent | sin | 16 | NA |
| 59 | 41.78 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 78 | 41.87 | radiation | 20.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 96 | 41.95 | humidity | 60.0 | 90 | > th | dose independent | rect. | 17 | 10 |
| 97 | 41.97 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 109 | 42.03 | humidity | 80.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 134 | 42.22 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 15 |
| 135 | 42.22 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 15 |
| 159 | 42.31 | radiation | 1.0 | 90 | > th | dose independent | sin | 16 | NA |
| 178 | 42.34 | radiation | 40.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 180 | 42.35 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 184 | 42.36 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 4 |
| 198 | 42.39 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 10 |
| 214 | 42.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 15 |
| 216 | 42.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 221 | 42.48 | humidity | 80.0 | 270 | < th | dose independent | rect. | 13 | 2 |
| 223 | 42.48 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 18 | 9 |
| 227 | 42.51 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 15 |
| 231 | 42.53 | radiation | 20.0 | 270 | < th | dose independent | sin | 16 | NA |
| 233 | 42.54 | radiation | 1.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 246 | 42.59 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 2 |
| 253 | 42.61 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 276 | 42.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 278 | 42.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 283 | 42.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 291 | 42.72 | radiation | 20.0 | 270 | > th | dose independent | sin | 16 | NA |
| 313 | 42.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 316 | 42.73 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 15 |
| 324 | 42.75 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 331 | 42.76 | wind | 9.0 | 90 | < th | dose independent | rect. | 18 | 9 |
| 336 | 42.77 | temperature | 10.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 338 | 42.77 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 344 | 42.77 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 15 |
| 380 | 42.80 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 15 |
| 395 | 42.82 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 404 | 42.84 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 21 |
| 574 | 43.15 | temperature | 30.0 | 10 | < th | dose independent | rect. | 18 | 9 |
| 603 | 43.21 | wind | 1.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 649 | 43.28 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 12 | 11 |
| 677 | 43.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 765 | 43.41 | wind | 3.0 | 270 | > th | dose independent | rect. | 12 | 4 |
| 772 | 43.42 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 18 | 9 |
| 773 | 43.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 776 | 43.42 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 18 | 9 |
| 809 | 43.47 | radiation | 1.0 | 270 | > th | dose independent | sin | 20 | NA |
| 837 | 43.51 | radiation | 1.0 | 270 | < th | dose independent | sin | 20 | NA |
| 862 | 43.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 6 |
| 865 | 43.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 6 |
| 898 | 43.58 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 907 | 43.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 17 |
| 914 | 43.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 17 |
| 962 | 43.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 18 |