Os06g0608100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0608100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 251.17 | 0.745 | 2.94 | -0.00215 | 0.0229 | 10.4 | -0.562 | -27.9 | -0.0177 | 20.9 | 49.74 | 11 | -- | -- |
| 256.24 | 0.751 | 2.86 | 0.26 | 0.0456 | -0.382 | -0.516 | -- | -0.0282 | 21 | 49 | 186 | -- | -- |
| 251.02 | 0.738 | 3.05 | -0.306 | 0.0167 | 22.5 | -- | -59.9 | -0.0533 | 19.8 | 49.02 | 11 | -- | -- |
| 256.51 | 0.746 | 2.86 | 0.295 | 0.0707 | -0.674 | -- | -- | -0.0311 | 20.6 | 50 | 248 | -- | -- |
| 250.44 | 0.737 | 3.03 | -0.219 | -- | 22.8 | -- | -59.9 | -0.0191 | -- | 49.02 | 11 | -- | -- |
| 256.67 | 0.751 | 2.86 | 0.245 | 0.0521 | -- | -0.482 | -- | -0.0262 | 20.8 | -- | -- | -- | -- |
| 257.44 | 0.751 | 2.86 | 0.26 | 0.0533 | -- | -- | -- | -0.0262 | 21.4 | -- | -- | -- | -- |
| 256.8 | 0.746 | 2.86 | 0.289 | -- | -0.652 | -- | -- | -0.0336 | -- | 49.51 | 248 | -- | -- |
| 258.73 | 0.749 | 2.86 | -- | 0.0677 | -0.486 | -- | -- | -0.063 | 20.5 | 50 | 249 | -- | -- |
| 257.61 | 0.75 | 2.85 | 0.261 | -- | -- | -- | -- | -0.0264 | -- | -- | -- | -- | -- |
| 259.23 | 0.753 | 2.86 | -- | 0.0538 | -- | -- | -- | -0.0553 | 21.8 | -- | -- | -- | -- |
| 258.98 | 0.75 | 2.86 | -- | -- | -0.462 | -- | -- | -0.0623 | -- | 49.41 | 248 | -- | -- |
| 259.4 | 0.752 | 2.86 | -- | -- | -- | -- | -- | -0.0554 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 240.36 | wind | 3.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 2 | 240.38 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 7 | 240.86 | wind | 5.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 9 | 240.95 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 3 |
| 14 | 241.08 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 15 |
| 21 | 241.17 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 33 | 241.53 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 34 | 241.64 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 5 |
| 54 | 241.65 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 5 |
| 74 | 241.67 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 3 |
| 78 | 241.67 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 85 | 241.78 | wind | 5.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 119 | 242.53 | wind | 3.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 144 | 242.82 | precipitation | 0.1 | 30 | > th | dose independent | sin | 2 | NA |
| 145 | 242.86 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 2 | NA |
| 147 | 242.99 | precipitation | 0.1 | 30 | < th | dose independent | sin | 2 | NA |
| 149 | 242.99 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 2 | NA |
| 157 | 243.33 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 24 | 5 |
| 158 | 243.35 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 24 | 5 |
| 265 | 244.14 | wind | 7.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 308 | 244.76 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 7 | 4 |
| 310 | 244.77 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 355 | 245.07 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 384 | 245.40 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 13 | 8 |
| 385 | 245.42 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 386 | 245.42 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 476 | 245.89 | radiation | 40.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 477 | 245.92 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 517 | 246.05 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 519 | 246.07 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 7 |
| 530 | 246.11 | wind | 7.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 548 | 246.13 | wind | 7.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 570 | 246.18 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 637 | 246.50 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 12 | 8 |
| 653 | 246.60 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 668 | 246.69 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 776 | 246.95 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 18 | 3 |
| 782 | 247.03 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 789 | 247.03 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 13 | 8 |
| 826 | 247.19 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 879 | 247.29 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 901 | 247.39 | wind | 3.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 902 | 247.39 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 924 | 247.51 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 947 | 247.71 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 1000 | 247.91 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 6 | 5 |