Os06g0606000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CBL-interacting serine/threonine-protein kinase 24 (EC 2.7.1.37) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein).
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Os06g0606000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CBL-interacting serine/threonine-protein kinase 24 (EC 2.7.1.37) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.31 | 0.295 | 9.46 | -0.452 | 0.726 | 0.91 | 0.346 | -1.72 | -0.0181 | 3.88 | 17.5 | 1952 | -- | -- |
| 41.69 | 0.301 | 9.39 | -0.0134 | 0.715 | 0.955 | 0.321 | -- | 0.122 | 3.81 | 13.04 | 1891 | -- | -- |
| 39.64 | 0.293 | 9.46 | -0.446 | 0.733 | 0.909 | -- | -1.7 | -0.017 | 3.81 | 17.5 | 1901 | -- | -- |
| 41.99 | 0.302 | 9.4 | -0.0168 | 0.724 | 0.994 | -- | -- | 0.0983 | 3.8 | 10.58 | 1888 | -- | -- |
| 60.61 | 0.363 | 9.45 | -0.319 | -- | 1.07 | -- | -1.25 | 0.00434 | -- | 17 | 1189 | -- | -- |
| 58.35 | 0.358 | 9.36 | 0.311 | 0.702 | -- | 0.324 | -- | 0.287 | 3.45 | -- | -- | -- | -- |
| 58.68 | 0.359 | 9.36 | 0.305 | 0.703 | -- | -- | -- | 0.285 | 3.43 | -- | -- | -- | -- |
| 61.92 | 0.367 | 9.41 | -0.0208 | -- | 1.16 | -- | -- | 0.101 | -- | 15.25 | 1181 | -- | -- |
| 42 | 0.302 | 9.4 | -- | 0.728 | 0.987 | -- | -- | 0.102 | 3.76 | 10.74 | 1874 | -- | -- |
| 86.45 | 0.434 | 9.36 | 0.334 | -- | -- | -- | -- | 0.304 | -- | -- | -- | -- | -- |
| 61.13 | 0.366 | 9.37 | -- | 0.709 | -- | -- | -- | 0.251 | 3.42 | -- | -- | -- | -- |
| 61.9 | 0.366 | 9.41 | -- | -- | 1.19 | -- | -- | 0.0945 | -- | 13.91 | 1184 | -- | -- |
| 89.4 | 0.441 | 9.37 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.44 | temperature | 15 | 90 | > th | dose dependent | rect. | 15 | 15 |
| 2 | 38.89 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 6 | 39.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 7 | 39.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 10 | 39.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 14 | 39.46 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 15 | 39.47 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 18 | 39.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 18 |
| 39 | 39.56 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 58 | 39.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 64 | 39.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 87 | 39.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 16 |
| 123 | 39.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 149 | 39.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 175 | 39.86 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 190 | 39.87 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 207 | 39.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 240 | 39.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 247 | 39.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 325 | 40.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 391 | 40.07 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 392 | 40.08 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 403 | 40.09 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 448 | 40.11 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 594 | 40.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 612 | 40.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 647 | 40.23 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 17 |
| 718 | 40.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 724 | 40.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 9 |
| 805 | 40.35 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 837 | 40.37 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 866 | 40.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 14 |
| 946 | 40.45 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |