Os06g0602700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Plastidial ADP-glucose transporter.
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Os06g0602700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Plastidial ADP-glucose transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.5 | 0.337 | 12.7 | -0.407 | 0.554 | -0.668 | 0.993 | 0.851 | -0.192 | 21.5 | 0.3638 | 42 | -- | -- |
| 52.59 | 0.338 | 12.7 | -0.448 | 0.568 | -0.695 | 0.121 | -- | -0.202 | 21.2 | 0.14 | 48 | -- | -- |
| 53.32 | 0.34 | 12.7 | -0.319 | 0.576 | -0.676 | -- | 0.385 | -0.241 | 21.4 | 0.1495 | 44 | -- | -- |
| 52.62 | 0.338 | 12.7 | -0.446 | 0.552 | -0.692 | -- | -- | -0.2 | 21.3 | 0.14 | 48 | -- | -- |
| 62.83 | 0.371 | 12.7 | -0.429 | -- | -0.941 | -- | 0.273 | -0.207 | -- | 0.2149 | 59 | -- | -- |
| 61.05 | 0.366 | 12.7 | -0.506 | 1.27 | -- | -0.095 | -- | -0.21 | 22.9 | -- | -- | -- | -- |
| 61.09 | 0.366 | 12.7 | -0.502 | 1.28 | -- | -- | -- | -0.21 | 22.9 | -- | -- | -- | -- |
| 62.9 | 0.369 | 12.7 | -0.443 | -- | -0.996 | -- | -- | -0.227 | -- | 0.19 | 56 | -- | -- |
| 57.67 | 0.354 | 12.7 | -- | 0.597 | -0.665 | -- | -- | -0.15 | 21.3 | 0.1355 | 51 | -- | -- |
| 162.15 | 0.595 | 12.7 | -0.474 | -- | -- | -- | -- | -0.201 | -- | -- | -- | -- | -- |
| 67.73 | 0.385 | 12.7 | -- | 1.27 | -- | -- | -- | -0.154 | 22.9 | -- | -- | -- | -- |
| 66.57 | 0.38 | 12.7 | -- | -- | -1.01 | -- | -- | -0.19 | -- | 0.19 | 43 | -- | -- |
| 168.09 | 0.605 | 12.7 | -- | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.33 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 2 | 45.45 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 20 |
| 10 | 46.06 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 19 | 10 |
| 13 | 46.32 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 15 | 46.43 | temperature | 20.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 17 | 46.47 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 5 |
| 28 | 46.83 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 20 |
| 33 | 46.94 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 36 | 46.98 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 58 | 47.54 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 15 |
| 62 | 47.62 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 13 |
| 66 | 47.67 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 107 | 48.36 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 19 |
| 135 | 48.83 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 154 | 49.04 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 13 |
| 170 | 49.30 | temperature | 25.0 | 270 | < th | dose independent | sin | 10 | NA |
| 181 | 49.41 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 190 | 49.47 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 195 | 49.49 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 196 | 49.49 | radiation | 1.0 | 30 | < th | dose dependent | sin | 9 | NA |
| 199 | 49.53 | radiation | 1.0 | 30 | < th | dose independent | sin | 10 | NA |
| 205 | 49.56 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 18 |
| 224 | 49.65 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 13 |
| 231 | 49.69 | wind | 9.0 | 30 | < th | dose dependent | rect. | 18 | 11 |
| 236 | 49.72 | radiation | 30.0 | 30 | < th | dose independent | rect. | 5 | 6 |
| 269 | 49.98 | temperature | 25.0 | 270 | > th | dose independent | sin | 11 | NA |
| 270 | 49.99 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 292 | 50.13 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 300 | 50.17 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 303 | 50.18 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 324 | 50.26 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 3 | 12 |
| 325 | 50.26 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 20 |
| 326 | 50.26 | wind | 9.0 | 30 | < th | dose dependent | rect. | 16 | 13 |
| 340 | 50.40 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 377 | 50.52 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 382 | 50.55 | radiation | 1.0 | 30 | > th | dose independent | sin | 10 | NA |
| 386 | 50.56 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 393 | 50.57 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 435 | 50.69 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 5 |
| 451 | 50.73 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 18 | 12 |
| 462 | 50.76 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 464 | 50.77 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 491 | 50.81 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 11 | 18 |
| 493 | 50.82 | radiation | 1.0 | 30 | < th | dose independent | rect. | 18 | 12 |
| 508 | 50.84 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 9 | 20 |
| 514 | 50.86 | humidity | 80.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 539 | 50.92 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 542 | 50.93 | wind | 7.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 546 | 50.94 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 550 | 50.95 | wind | 5.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 553 | 50.95 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 4 |
| 555 | 50.95 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 5 | 6 |
| 558 | 50.96 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 20 |
| 572 | 51.00 | wind | 5.0 | 30 | < th | dose independent | rect. | 5 | 4 |
| 573 | 51.00 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 11 |
| 581 | 51.01 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 16 | 14 |
| 583 | 51.02 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 4 |
| 592 | 51.03 | temperature | 20.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 607 | 51.06 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 611 | 51.07 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 2 |
| 613 | 51.07 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 631 | 51.11 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 4 |
| 632 | 51.11 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 4 |
| 635 | 51.12 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 641 | 51.13 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 643 | 51.13 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 644 | 51.13 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 646 | 51.13 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 647 | 51.13 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 652 | 51.13 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 654 | 51.13 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 4 |
| 655 | 51.13 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 657 | 51.13 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 659 | 51.13 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 4 |
| 662 | 51.13 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 20 |
| 663 | 51.13 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 681 | 51.17 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 18 | 11 |
| 686 | 51.18 | humidity | 60.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 693 | 51.20 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 707 | 51.25 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 20 |
| 709 | 51.25 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 20 |
| 712 | 51.26 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 739 | 51.30 | temperature | 10.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 763 | 51.34 | radiation | 1.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 773 | 51.35 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 19 |
| 783 | 51.37 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 4 |
| 786 | 51.38 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 10 |
| 814 | 51.42 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 5 |
| 822 | 51.43 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 24 | 5 |
| 839 | 51.46 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 6 |
| 858 | 51.47 | temperature | 30.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 871 | 51.50 | wind | 7.0 | 30 | < th | dose independent | rect. | 18 | 11 |
| 872 | 51.50 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 978 | 51.60 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 16 |
| 988 | 51.61 | radiation | 40.0 | 720 | < th | dose independent | rect. | 15 | 4 |