Os06g0602500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os06g0602500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 293.28 | 0.805 | 9.41 | 2.04 | 0.639 | -1.25 | -1.9 | -4.33 | 1 | 2.68 | 19.7 | 40 | -- | -- |
| 301.82 | 0.809 | 9.32 | 2.78 | 0.579 | -1.5 | -0.565 | -- | 1.21 | 2.19 | 22.6 | 45 | -- | -- |
| 300.05 | 0.807 | 9.39 | 2.31 | 0.7 | -1.17 | -- | -2.49 | 1.06 | 1.6 | 22.4 | 80 | -- | -- |
| 302.91 | 0.811 | 9.32 | 2.81 | 0.584 | -1.45 | -- | -- | 1.2 | 1.97 | 22.6 | 48 | -- | -- |
| 315.32 | 0.827 | 9.33 | 2.73 | -- | -1.87 | -- | -1.47 | 1.24 | -- | 22.6 | 46 | -- | -- |
| 336.81 | 0.86 | 9.37 | 2.5 | 1.15 | -- | -0.21 | -- | 0.979 | 2.53 | -- | -- | -- | -- |
| 336.97 | 0.86 | 9.37 | 2.51 | 1.15 | -- | -- | -- | 0.98 | 2.52 | -- | -- | -- | -- |
| 316.02 | 0.828 | 9.3 | 2.92 | -- | -1.99 | -- | -- | 1.28 | -- | 22.9 | 21 | -- | -- |
| 495.87 | 1.04 | 9.41 | -- | 0.904 | -0.719 | -- | -- | 0.79 | 2.42 | 23.6 | 25 | -- | -- |
| 414.67 | 0.952 | 9.36 | 2.56 | -- | -- | -- | -- | 1.01 | -- | -- | -- | -- | -- |
| 502.71 | 1.05 | 9.43 | -- | 1.2 | -- | -- | -- | 0.701 | 2.55 | -- | -- | -- | -- |
| 529.55 | 1.07 | 9.39 | -- | -- | -1.51 | -- | -- | 0.877 | -- | 23.9 | 24 | -- | -- |
| 587.07 | 1.13 | 9.43 | -- | -- | -- | -- | -- | 0.726 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 286.22 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 2 | 286.57 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 4 | 286.59 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 7 | 286.60 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 13 | 286.83 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 15 | 287.43 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 47 | 288.28 | temperature | 10 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 70 | 288.52 | radiation | 20 | 1440 | < th | dose dependent | sin | 17 | NA |
| 101 | 289.04 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 113 | 289.17 | radiation | 10 | 1440 | > th | dose independent | sin | 18 | NA |
| 127 | 289.43 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 170 | 289.73 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 207 | 289.97 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 255 | 290.46 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 4 |
| 320 | 290.93 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 344 | 291.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 426 | 291.64 | humidity | 80 | 1440 | < th | dose dependent | sin | 18 | NA |
| 444 | 291.73 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 476 | 291.98 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 521 | 292.27 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 526 | 292.27 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 22 |
| 543 | 292.35 | radiation | 40 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 565 | 292.42 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 574 | 292.50 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 582 | 292.53 | radiation | 1 | 1440 | > th | dose dependent | sin | 16 | NA |
| 585 | 292.54 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 586 | 292.54 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 596 | 292.57 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 597 | 292.57 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 616 | 292.66 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 622 | 292.71 | radiation | 40 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 659 | 292.81 | radiation | 40 | 1440 | < th | dose dependent | rect. | 15 | 9 |
| 670 | 292.84 | radiation | 40 | 1440 | < th | dose dependent | rect. | 15 | 13 |
| 706 | 292.98 | temperature | 20 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 777 | 293.28 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 778 | 293.29 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 795 | 293.39 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 808 | 293.41 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 859 | 293.56 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 16 |
| 868 | 293.58 | humidity | 50 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 883 | 293.66 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 926 | 293.77 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 927 | 293.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 932 | 293.81 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 940 | 293.84 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 943 | 293.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 944 | 293.85 | humidity | 60 | 720 | > th | dose independent | rect. | 9 | 12 |
| 951 | 293.86 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 953 | 293.86 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 989 | 293.95 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 14 |