Os06g0600400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0600400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 428.82 | 0.973 | 7.68 | 5.41 | 1.26 | -4.1 | 1.14 | 5.92 | 2.57 | 13.7 | 19.65 | 709 | -- | -- |
| 457.39 | 0.996 | 7.84 | 4.34 | 1.25 | -4.17 | 0.703 | -- | 2.24 | 13.4 | 18 | 672 | -- | -- |
| 433.75 | 0.97 | 7.68 | 5.42 | 1.29 | -4.06 | -- | 5.89 | 2.56 | 13.6 | 19.61 | 693 | -- | -- |
| 452.47 | 0.991 | 7.79 | 4.15 | 1.7 | -3.23 | -- | -- | 2.2 | 10.6 | 18.21 | 1376 | -- | -- |
| 497.15 | 1.04 | 7.68 | 5.39 | -- | -4.21 | -- | 5.15 | 2.56 | -- | 20.19 | 884 | -- | -- |
| 724.07 | 1.26 | 7.95 | 3.1 | 1.88 | -- | 0.123 | -- | 1.51 | 11 | -- | -- | -- | -- |
| 724.13 | 1.26 | 7.95 | 3.11 | 1.88 | -- | -- | -- | 1.51 | 11 | -- | -- | -- | -- |
| 520.23 | 1.06 | 7.81 | 4.41 | -- | -4.45 | -- | -- | 2.33 | -- | 18 | 880 | -- | -- |
| 856.86 | 1.36 | 7.96 | -- | 1.33 | -2.07 | -- | -- | 1.5 | 10.8 | 22 | 1008 | -- | -- |
| 944.43 | 1.44 | 8 | 3.06 | -- | -- | -- | -- | 1.5 | -- | -- | -- | -- | -- |
| 978.36 | 1.46 | 8.03 | -- | 1.86 | -- | -- | -- | 1.17 | 10.9 | -- | -- | -- | -- |
| 948.09 | 1.43 | 7.98 | -- | -- | -2.78 | -- | -- | 1.57 | -- | 22 | 869 | -- | -- |
| 1192.03 | 1.61 | 8.08 | -- | -- | -- | -- | -- | 1.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 421.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 3 | 422.62 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 4 | 422.67 | radiation | 30 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 5 | 423.10 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 7 | 425.02 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 8 | 425.16 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 9 | 425.51 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 13 | 425.72 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 14 | 425.92 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 16 | 425.95 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 26 | 426.82 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 30 | 427.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 22 |
| 32 | 427.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 41 | 427.82 | temperature | 15 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 45 | 428.11 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 48 | 428.30 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 66 | 428.55 | temperature | 15 | 4320 | > th | dose dependent | rect. | 15 | 3 |
| 67 | 428.64 | temperature | 15 | 4320 | > th | dose dependent | rect. | 9 | 10 |
| 79 | 429.02 | wind | 5 | 43200 | < th | dose independent | sin | 4 | NA |
| 88 | 429.26 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 92 | 429.31 | temperature | 15 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 106 | 429.63 | wind | 5 | 43200 | > th | dose independent | sin | 4 | NA |
| 117 | 429.83 | temperature | 15 | 4320 | > th | dose dependent | sin | 21 | NA |
| 131 | 429.97 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 154 | 430.16 | temperature | 15 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 173 | 430.35 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 194 | 430.63 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 195 | 430.64 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 203 | 430.68 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 204 | 430.69 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 205 | 430.69 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 211 | 430.73 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 250 | 431.17 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 278 | 431.44 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 306 | 431.67 | temperature | 15 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 389 | 432.35 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 443 | 432.80 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 460 | 432.97 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 467 | 433.01 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 493 | 433.19 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 513 | 433.35 | radiation | 1 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 524 | 433.47 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 529 | 433.51 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 604 | 434.03 | temperature | 30 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 679 | 434.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 21 |
| 717 | 434.78 | wind | 3 | 43200 | > th | dose dependent | sin | 5 | NA |
| 744 | 435.05 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 802 | 435.46 | wind | 3 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 830 | 435.63 | temperature | 15 | 4320 | > th | dose dependent | no | NA | NA |
| 835 | 435.66 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 858 | 435.91 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 886 | 436.14 | temperature | 15 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 893 | 436.19 | temperature | 15 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 933 | 436.55 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 4 |