Os06g0599200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0599200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 598.42 | 1.15 | 4 | 1.51 | 0.611 | -4.09 | -0.721 | -6.38 | 1.2 | 5.65 | 1.028 | 1452 | -- | -- |
| 629.06 | 1.17 | 3.88 | 2.17 | 0.526 | -3.45 | -0.725 | -- | 1.36 | 6.94 | 1.371 | 1462 | -- | -- |
| 597.96 | 1.14 | 3.99 | 1.51 | 0.606 | -4.1 | -- | -6.4 | 1.2 | 5.45 | 1.04 | 1449 | -- | -- |
| 630.43 | 1.17 | 3.89 | 2.25 | 0.589 | -3.47 | -- | -- | 1.38 | 6.62 | 1.38 | 1462 | -- | -- |
| 617.05 | 1.16 | 4 | 1.55 | -- | -4.07 | -- | -6.2 | 1.22 | -- | 1.042 | 1452 | -- | -- |
| 785.39 | 1.31 | 4 | 1.66 | 0.559 | -- | -0.842 | -- | 0.923 | 4.91 | -- | -- | -- | -- |
| 787.09 | 1.31 | 4 | 1.66 | 0.553 | -- | -- | -- | 0.927 | 4.59 | -- | -- | -- | -- |
| 647.49 | 1.19 | 3.9 | 2.28 | -- | -3.42 | -- | -- | 1.39 | -- | 1.37 | 1461 | -- | -- |
| 753.04 | 1.28 | 3.96 | -- | 0.679 | -3.12 | -- | -- | 1.18 | 6.65 | 1.629 | 1487 | -- | -- |
| 803.36 | 1.32 | 4.01 | 1.68 | -- | -- | -- | -- | 0.941 | -- | -- | -- | -- | -- |
| 859.77 | 1.37 | 4.04 | -- | 0.584 | -- | -- | -- | 0.742 | 4.52 | -- | -- | -- | -- |
| 768.98 | 1.29 | 3.96 | -- | -- | -2.77 | -- | -- | 1.14 | -- | 1.62 | 1480 | -- | -- |
| 877.99 | 1.38 | 4.05 | -- | -- | -- | -- | -- | 0.755 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 577.74 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 2 | 577.97 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 5 | 578.77 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 15 | 580.20 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 16 | 580.31 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 28 | 581.05 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 31 | 581.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 32 | 581.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 8 |
| 34 | 581.35 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 35 | 581.36 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 43 | 581.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 46 | 581.68 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 47 | 581.68 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 11 |
| 85 | 582.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 86 | 582.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 97 | 582.89 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 132 | 583.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 133 | 583.70 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 143 | 583.79 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 145 | 583.81 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 155 | 583.88 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 17 | NA |
| 158 | 583.93 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 17 | NA |
| 160 | 583.93 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 17 | NA |
| 184 | 584.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 227 | 584.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 22 |
| 229 | 584.63 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 14 | NA |
| 239 | 584.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 21 |
| 260 | 584.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 264 | 584.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 315 | 585.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 23 |
| 321 | 585.38 | precipitation | 0.1 | 43200 | > th | dose dependent | no | NA | NA |
| 345 | 585.58 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 356 | 585.69 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 13 |
| 415 | 586.19 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 420 | 586.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 423 | 586.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 14 |
| 446 | 586.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 541 | 587.13 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 589 | 587.43 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 595 | 587.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 16 |
| 620 | 587.74 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 633 | 587.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 20 |
| 643 | 587.94 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 654 | 588.00 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 9 |
| 669 | 588.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 675 | 588.14 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 17 |
| 676 | 588.14 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 17 |
| 699 | 588.27 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 724 | 588.43 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 750 | 588.58 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 788 | 588.80 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 806 | 588.96 | humidity | 90.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 810 | 589.02 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 23 | NA |
| 815 | 589.06 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 17 |
| 829 | 589.18 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 837 | 589.26 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 846 | 589.32 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 870 | 589.50 | radiation | 1.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 893 | 589.65 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 905 | 589.77 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 12 |
| 912 | 589.81 | radiation | 1.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 913 | 589.81 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 6 |
| 919 | 589.83 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 10 |
| 941 | 589.91 | humidity | 90.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 963 | 590.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 21 |
| 965 | 590.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 21 |
| 994 | 590.13 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 21 |