Os06g0598800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fatty acid elongase 1-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0598800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Fatty acid elongase 1-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.78 | 0.561 | 8.41 | 1.61 | 1.5 | -0.91 | -1.12 | -1.11 | 0.168 | 8.52 | 57 | 895 | -- | -- |
| 143.99 | 0.559 | 8.4 | 1.65 | 1.52 | -1.01 | -0.946 | -- | 0.155 | 8.46 | 56.59 | 934 | -- | -- |
| 146.33 | 0.563 | 8.41 | 1.6 | 1.53 | -0.907 | -- | -0.726 | 0.147 | 8.54 | 56.89 | 938 | -- | -- |
| 146.77 | 0.564 | 8.39 | 1.62 | 1.53 | -0.971 | -- | -- | 0.162 | 8.52 | 56.66 | 940 | -- | -- |
| 187.16 | 0.637 | 8.38 | 1.71 | -- | -2.09 | -- | 0.543 | 0.415 | -- | 75 | 797 | -- | -- |
| 169.27 | 0.61 | 8.36 | 1.48 | 1.66 | -- | -0.642 | -- | 0.311 | 8.72 | -- | -- | -- | -- |
| 170.61 | 0.612 | 8.36 | 1.46 | 1.66 | -- | -- | -- | 0.311 | 8.76 | -- | -- | -- | -- |
| 187.84 | 0.638 | 8.38 | 1.67 | -- | -2.05 | -- | -- | 0.421 | -- | 74.91 | 801 | -- | -- |
| 213.94 | 0.681 | 8.41 | -- | 1.55 | -0.678 | -- | -- | 0.0643 | 8.65 | 57 | 857 | -- | -- |
| 326.47 | 0.844 | 8.4 | 1.46 | -- | -- | -- | -- | 0.324 | -- | -- | -- | -- | -- |
| 226.61 | 0.704 | 8.39 | -- | 1.66 | -- | -- | -- | 0.149 | 8.7 | -- | -- | -- | -- |
| 252.29 | 0.74 | 8.42 | -- | -- | -1.76 | -- | -- | 0.221 | -- | 82.35 | 724 | -- | -- |
| 382.69 | 0.913 | 8.44 | -- | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.71 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 3 | 133.51 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 5 | 133.89 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 2 |
| 45 | 136.87 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 10 |
| 54 | 137.01 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 15 |
| 86 | 137.52 | radiation | 1 | 720 | > th | dose independent | rect. | 8 | 11 |
| 126 | 138.00 | humidity | 50 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 147 | 138.52 | radiation | 1 | 720 | > th | dose independent | rect. | 16 | 3 |
| 185 | 138.92 | humidity | 90 | 720 | < th | dose dependent | sin | 17 | NA |
| 196 | 139.08 | radiation | 10 | 720 | < th | dose dependent | rect. | 14 | 10 |
| 202 | 139.25 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 3 |
| 222 | 139.58 | temperature | 25 | 720 | > th | dose dependent | sin | 15 | NA |
| 248 | 139.84 | humidity | 70 | 720 | < th | dose dependent | sin | 12 | NA |
| 263 | 139.88 | humidity | 70 | 720 | < th | dose independent | rect. | 16 | 3 |
| 264 | 139.88 | humidity | 50 | 720 | > th | dose dependent | sin | 16 | NA |
| 294 | 140.16 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 9 |
| 302 | 140.23 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 1 |
| 303 | 140.23 | humidity | 70 | 720 | < th | dose independent | rect. | 16 | 16 |
| 409 | 140.99 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 17 |
| 446 | 141.27 | humidity | 70 | 720 | < th | dose independent | sin | 13 | NA |
| 449 | 141.37 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 10 |
| 453 | 141.40 | humidity | 50 | 720 | > th | dose dependent | rect. | 4 | 19 |
| 476 | 141.61 | humidity | 90 | 720 | < th | dose dependent | rect. | 11 | 14 |
| 523 | 141.83 | radiation | 1 | 720 | > th | dose independent | sin | 19 | NA |
| 537 | 141.94 | humidity | 60 | 720 | > th | dose independent | sin | 11 | NA |
| 538 | 141.94 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 17 |
| 597 | 142.22 | radiation | 1 | 720 | < th | dose independent | rect. | 9 | 15 |
| 628 | 142.42 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 15 |
| 640 | 142.46 | radiation | 1 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 685 | 142.63 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 7 |
| 741 | 142.93 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 796 | 143.19 | humidity | 60 | 720 | > th | dose independent | rect. | 4 | 18 |
| 824 | 143.34 | radiation | 1 | 720 | > th | dose independent | sin | 15 | NA |
| 881 | 143.60 | humidity | 50 | 720 | > th | dose dependent | rect. | 12 | 6 |
| 885 | 143.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 4 |
| 923 | 143.76 | radiation | 1 | 720 | < th | dose independent | sin | 16 | NA |
| 924 | 143.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 2 |