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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0593800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.5 (0.0283) R2 : 0.615
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.59 (0.0738) R2dC : 0.392 R2C : 0.391
β3 : -2.65 (0.177) R2dE : 0.189 R2E : 0.188
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.384 (0.0598) R2dN8 : 0.0481 R2N8 : 0.0184
σ : 0.531
deviance : 130.18
__
_____
C
peak time of C : 5.14
E
wheather : radiation
threshold : 3.639
memory length : 1149
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 10.9
open length of G : 1.29

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
114.37 0.502 12.3 -6.4 1.66 -103 0.228 -307 -0.377 5.16 1.163 1128 11 0.994
182.78 0.635 14.5 0.564 1.6 -1.06 0.643 -- -0.273 5.31 1.163 1128 11 0.994
114.5 0.498 12.3 -6.41 1.66 -104 -- -307 -0.377 5.14 1.171 1127 11 1
128.65 0.528 14.5 0.244 1.57 -2.55 -- -- -0.373 5.13 3.488 1127 10.8 1.39
257.84 0.748 12.4 -6.16 -- -103 -- -306 -0.335 -- 1.3 1125 11 1.02
183.9 0.636 14.5 0.579 1.61 -- 0.627 -- -0.269 5.29 -- -- -- --
184.87 0.637 14.5 0.579 1.61 -- -- -- -0.272 5.26 -- -- -- --
259.33 0.75 14.5 0.302 -- -2.55 -- -- -0.353 -- 4.398 1190 11.2 1.05
130.18 0.531 14.5 -- 1.59 -2.65 -- -- -0.384 5.14 3.639 1149 10.9 1.29
320.2 0.836 14.5 0.635 -- -- -- -- -0.232 -- -- -- -- --
193.71 0.651 14.5 -- 1.62 -- -- -- -0.336 5.25 -- -- -- --
261.69 0.753 14.5 -- -- -2.75 -- -- -0.363 -- 4.371 1164 11.2 0.983
330.83 0.849 14.5 -- -- -- -- -- -0.302 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 127.52 radiation 1.0 1440 > th dose independent rect. 9 4
11 132.26 radiation 1.0 1440 < th dose independent rect. 11 1
12 132.26 radiation 1.0 1440 < th dose dependent rect. 11 1
13 133.32 radiation 1.0 1440 < th dose independent rect. 9 3
14 133.32 radiation 1.0 1440 < th dose dependent rect. 9 3
31 135.07 radiation 1.0 1440 < th dose independent rect. 13 1
32 135.07 radiation 1.0 1440 < th dose dependent rect. 13 1
53 139.42 radiation 1.0 1440 > th dose independent rect. 9 1
71 142.71 humidity 70.0 14400 < th dose dependent rect. 21 1
82 142.91 radiation 20.0 1440 < th dose dependent rect. 11 1
87 145.22 humidity 50.0 90 > th dose dependent rect. 13 4
88 145.26 humidity 60.0 14400 < th dose independent rect. 6 1
90 145.26 humidity 60.0 14400 < th dose independent rect. 20 1
92 145.26 radiation 20.0 14400 > th dose independent rect. 17 1
143 145.26 humidity 60.0 14400 < th dose dependent rect. 6 1
147 145.26 radiation 20.0 14400 > th dose dependent rect. 17 1
203 146.40 humidity 60.0 270 > th dose independent rect. 12 3
206 146.95 humidity 60.0 14400 > th dose independent rect. 7 1
208 146.97 humidity 50.0 270 > th dose dependent rect. 13 1
216 147.78 humidity 50.0 10 > th dose dependent rect. 13 4
218 147.88 humidity 60.0 270 > th dose independent rect. 11 6
219 147.90 atmosphere 1005.0 10 < th dose dependent rect. 24 7
226 149.10 radiation 20.0 1440 < th dose independent rect. 11 2
228 149.29 humidity 50.0 10 > th dose dependent rect. 1 16
232 149.48 radiation 1.0 1440 > th dose independent rect. 4 1
242 149.48 radiation 1.0 1440 > th dose dependent rect. 4 1
276 150.96 temperature 30.0 90 < th dose independent rect. 13 4
296 152.03 wind 7.0 4320 > th dose independent rect. 18 1
301 152.09 wind 3.0 270 > th dose independent rect. 13 1
303 152.11 wind 1.0 90 > th dose independent rect. 17 20
304 152.14 radiation 10.0 10 < th dose dependent rect. 10 7
309 152.36 wind 7.0 4320 < th dose independent rect. 18 1
332 152.73 wind 5.0 90 > th dose independent rect. 12 5
333 152.74 humidity 60.0 14400 > th dose independent rect. 20 12
334 152.75 radiation 40.0 30 < th dose independent rect. 12 5
337 152.78 wind 1.0 90 > th dose dependent rect. 13 4
342 153.00 atmosphere 995.0 90 > th dose dependent rect. 13 4
348 153.16 wind 5.0 10 > th dose independent rect. 13 4
350 153.19 wind 5.0 4320 > th dose dependent rect. 18 1
357 153.47 radiation 10.0 10 < th dose dependent rect. 13 4
365 153.60 radiation 20.0 10 < th dose dependent rect. 1 16
366 153.61 atmosphere 1005.0 270 > th dose independent rect. 12 3
378 153.82 atmosphere 1005.0 270 < th dose dependent rect. 1 1
380 153.87 radiation 10.0 10 < th dose dependent rect. 8 9
397 154.15 humidity 80.0 270 > th dose dependent rect. 12 1
398 154.16 humidity 80.0 270 > th dose independent rect. 12 1
402 154.24 wind 1.0 270 < th dose dependent rect. 24 1
405 154.31 temperature 20.0 1440 > th dose independent rect. 22 6
417 154.46 temperature 20.0 1440 < th dose independent rect. 22 6
423 154.55 atmosphere 1005.0 270 > th dose independent rect. 13 1
443 154.74 radiation 1.0 1440 > th dose dependent rect. 11 2
450 154.81 radiation 40.0 10 < th dose dependent rect. 12 5
458 154.88 temperature 20.0 1440 > th dose independent rect. 1 3
462 154.92 atmosphere 995.0 270 > th dose dependent rect. 13 1
464 154.95 temperature 20.0 1440 < th dose independent rect. 1 3
468 154.98 humidity 70.0 14400 > th dose independent rect. 21 1
476 155.05 humidity 90.0 720 > th dose dependent rect. 20 1
483 155.10 humidity 70.0 14400 > th dose independent rect. 21 3
492 155.18 atmosphere 995.0 90 > th dose independent rect. 13 4
495 155.19 precipitation 0.1 270 < th dose independent rect. 15 21
496 155.19 precipitation 0.1 270 < th dose dependent rect. 15 21
504 155.24 humidity 60.0 270 > th dose independent rect. 23 17
507 155.27 humidity 70.0 14400 > th dose independent rect. 21 5
509 155.28 radiation 40.0 90 < th dose dependent rect. 12 5
510 155.31 radiation 20.0 30 < th dose independent rect. 1 16
526 155.54 precipitation 0.1 270 < th dose independent rect. 14 23
527 155.54 precipitation 0.1 270 < th dose dependent rect. 14 23
528 155.56 temperature 20.0 1440 > th dose independent rect. 6 1
529 155.57 precipitation 0.1 90 < th dose independent rect. 17 20
530 155.57 precipitation 0.1 90 < th dose dependent rect. 17 20
533 155.60 wind 1.0 270 > th dose dependent rect. 13 1
536 155.62 humidity 90.0 14400 > th dose dependent rect. 6 1
544 155.67 wind 9.0 90 < th dose independent rect. 13 4
546 155.68 atmosphere 995.0 43200 < th dose dependent rect. 13 11
547 155.71 atmosphere 995.0 43200 < th dose dependent rect. 12 14
568 155.85 precipitation 0.1 270 > th dose independent rect. 2 2
570 155.85 atmosphere 995.0 43200 < th dose independent rect. 24 16
571 155.85 wind 1.0 270 > th dose independent rect. 15 21
572 155.86 temperature 20.0 270 > th dose independent rect. 12 3
573 155.86 precipitation 0.1 270 > th dose dependent rect. 2 2
601 156.04 atmosphere 995.0 43200 > th dose independent rect. 24 15
613 156.12 humidity 80.0 1440 > th dose independent rect. 12 2
616 156.15 temperature 10.0 90 > th dose independent rect. 13 4
618 156.15 atmosphere 1010.0 90 < th dose independent rect. 13 4
620 156.15 temperature 10.0 90 > th dose independent rect. 17 20
626 156.17 atmosphere 995.0 43200 < th dose dependent sin 17 NA
635 156.26 atmosphere 995.0 43200 > th dose independent sin 4 NA
636 156.28 wind 7.0 4320 > th dose independent rect. 15 4
650 156.41 precipitation 0.1 90 < th dose independent rect. 13 4
651 156.41 precipitation 0.1 90 < th dose dependent rect. 13 4
668 156.52 radiation 20.0 1440 < th dose independent rect. 11 5
680 156.59 atmosphere 1010.0 270 < th dose dependent rect. 22 8
682 156.59 radiation 20.0 1440 < th dose dependent rect. 11 16
695 156.67 temperature 20.0 1440 > th dose independent rect. 21 10
703 156.71 wind 7.0 4320 < th dose independent rect. 15 4
712 156.76 atmosphere 995.0 43200 < th dose dependent rect. 11 16
718 156.79 temperature 20.0 1440 < th dose independent rect. 21 10
719 156.80 wind 9.0 90 < th dose independent rect. 17 20
723 156.84 atmosphere 995.0 43200 < th dose independent sin 4 NA
730 156.87 atmosphere 1005.0 720 < th dose independent rect. 19 6
732 156.87 atmosphere 995.0 90 > th dose independent rect. 17 20
736 156.93 atmosphere 995.0 30 > th dose dependent rect. 17 20
752 156.99 wind 1.0 270 < th dose independent rect. 23 2
768 157.04 atmosphere 1005.0 720 > th dose independent rect. 19 7
771 157.04 temperature 10.0 270 > th dose independent rect. 15 21
782 157.10 humidity 90.0 14400 > th dose independent rect. 6 1
811 157.26 temperature 20.0 270 > th dose independent rect. 13 1
815 157.28 humidity 80.0 1440 < th dose independent rect. 12 2
827 157.29 atmosphere 995.0 43200 < th dose independent rect. 2 20
849 157.36 humidity 70.0 14400 > th dose independent rect. 21 7
869 157.40 atmosphere 995.0 43200 < th dose independent rect. 7 19
878 157.44 atmosphere 1005.0 720 > th dose independent rect. 17 10
885 157.45 radiation 40.0 30 < th dose independent rect. 1 16
907 157.51 radiation 10.0 14400 < th dose dependent rect. 19 10
924 157.57 atmosphere 1005.0 720 < th dose independent rect. 20 3
952 157.66 radiation 20.0 1440 < th dose independent rect. 11 18
958 157.66 atmosphere 995.0 43200 < th dose dependent rect. 11 21
962 157.68 radiation 20.0 1440 < th dose independent rect. 11 16
977 157.71 humidity 80.0 1440 < th dose independent rect. 8 6