Os06g0591400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0591400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 267.89 | 0.769 | 13.3 | -0.871 | 0.732 | 3.07 | 0.168 | 9.2 | -1.19 | 23.2 | 6.9 | 22267 | -- | -- |
| 358.45 | 0.882 | 12.9 | -0.783 | 0.812 | 1.57 | 0.766 | -- | -0.957 | 22.7 | 8.2 | 22951 | -- | -- |
| 267.78 | 0.762 | 13.3 | -0.869 | 0.729 | 3.1 | -- | 9.27 | -1.2 | 23.1 | 6.924 | 22396 | -- | -- |
| 349.75 | 0.871 | 12.9 | -0.749 | 0.748 | 1.6 | -- | -- | -0.69 | 20.8 | 8.364 | 3894 | -- | -- |
| 300.8 | 0.808 | 13.3 | -0.786 | -- | 3.35 | -- | 9.7 | -1.18 | -- | 7 | 22418 | -- | -- |
| 360.04 | 0.89 | 13 | -1.64 | 0.79 | -- | 0.231 | -- | -1.13 | 23 | -- | -- | -- | -- |
| 360.26 | 0.889 | 13 | -1.65 | 0.789 | -- | -- | -- | -1.13 | 23 | -- | -- | -- | -- |
| 367.84 | 0.893 | 12.9 | -1.09 | -- | 1.53 | -- | -- | -0.934 | -- | 8.5 | 3797 | -- | -- |
| 369.76 | 0.896 | 12.9 | -- | 0.651 | 1.84 | -- | -- | -0.678 | 22.3 | 7.9 | 3889 | -- | -- |
| 399.03 | 0.933 | 12.9 | -1.63 | -- | -- | -- | -- | -1.13 | -- | -- | -- | -- | -- |
| 431.63 | 0.972 | 12.9 | -- | 0.776 | -- | -- | -- | -0.949 | 22.9 | -- | -- | -- | -- |
| 399.68 | 0.931 | 12.8 | -- | -- | 1.83 | -- | -- | -0.723 | -- | 8.1 | 3791 | -- | -- |
| 468.94 | 1.01 | 12.9 | -- | -- | -- | -- | -- | -0.945 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 257.53 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 3 | 257.86 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 4 | 258.08 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 6 | 258.71 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 19 | 264.12 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 20 | 264.17 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 47 | 265.78 | wind | 7.0 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 49 | 265.85 | wind | 7.0 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 75 | 267.14 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 92 | 267.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 103 | 267.92 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 16 | 11 |
| 107 | 268.02 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 164 | 269.51 | wind | 7.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 169 | 269.58 | wind | 7.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 249 | 271.36 | wind | 7.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 259 | 271.47 | wind | 7.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 304 | 272.07 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 316 | 272.26 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 16 | 15 |
| 319 | 272.29 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 332 | 272.46 | wind | 7.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 385 | 272.94 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 400 | 273.08 | wind | 7.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 404 | 273.13 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 441 | 273.38 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 676 | 274.60 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 736 | 274.80 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 768 | 274.95 | atmosphere | 1000.0 | 14400 | > th | dose dependent | sin | 18 | NA |
| 796 | 275.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 800 | 275.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 802 | 275.11 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 821 | 275.20 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 837 | 275.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 893 | 275.53 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 925 | 275.67 | wind | 3.0 | 43200 | > th | dose independent | rect. | 14 | 1 |