Os06g0591200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0591200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 569.27 | 1.12 | 12 | 0.565 | 0.807 | -4.05 | 0.715 | 1.15 | -0.9 | 3.26 | 25.1 | 1574 | 5.37 | -- |
| 568.72 | 1.11 | 12 | 0.318 | 0.767 | -3.88 | 0.756 | -- | -0.98 | 2.69 | 25.2 | 1647 | 5.54 | -- |
| 570.11 | 1.11 | 12 | 0.555 | 0.79 | -4.05 | -- | 1.21 | -0.917 | 3 | 25.16 | 1643 | 5.35 | -- |
| 570.38 | 1.11 | 12 | 0.284 | 0.775 | -3.92 | -- | -- | -0.981 | 2.95 | 25.15 | 1648 | 5.39 | -- |
| 601.54 | 1.14 | 12 | 0.446 | -- | -3.75 | -- | 0.612 | -0.934 | -- | 25.22 | 1656 | 7.57 | -- |
| 1079.63 | 1.54 | 12.1 | -0.715 | 0.577 | -- | 0.0659 | -- | -1.29 | 4.54 | -- | -- | -- | -- |
| 1079.64 | 1.54 | 12.1 | -0.715 | 0.578 | -- | -- | -- | -1.29 | 4.55 | -- | -- | -- | -- |
| 601.43 | 1.14 | 12 | 0.342 | -- | -3.72 | -- | -- | -0.967 | -- | 25.26 | 1654 | 8.14 | -- |
| 572.34 | 1.11 | 12 | -- | 0.769 | -3.84 | -- | -- | -1.04 | 2.97 | 25.22 | 1648 | 5.39 | -- |
| 1097.44 | 1.55 | 12.1 | -0.693 | -- | -- | -- | -- | -1.27 | -- | -- | -- | -- | -- |
| 1093.13 | 1.55 | 12 | -- | 0.564 | -- | -- | -- | -1.21 | 4.58 | -- | -- | -- | -- |
| 603.98 | 1.14 | 12 | -- | -- | -3.6 | -- | -- | -1.04 | -- | 25.3 | 1650 | 7.06 | -- |
| 1110.11 | 1.56 | 12 | -- | -- | -- | -- | -- | -1.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 573.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 9 | 577.24 | temperature | 25 | 1440 | > th | dose dependent | sin | 12 | NA |
| 12 | 577.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 25 | 579.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 34 | 580.69 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 45 | 581.16 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 59 | 581.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 60 | 581.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 12 |
| 62 | 581.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 98 | 583.20 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 113 | 584.28 | temperature | 30 | 1440 | < th | dose independent | sin | 21 | NA |
| 131 | 584.45 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 132 | 584.45 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 16 |
| 138 | 584.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 22 |
| 142 | 584.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 19 |
| 204 | 585.39 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 206 | 585.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 254 | 587.02 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 257 | 587.19 | temperature | 30 | 1440 | > th | dose independent | sin | 21 | NA |
| 268 | 587.51 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 325 | 588.21 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 326 | 588.21 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 360 | 588.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 361 | 588.41 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 453 | 589.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 506 | 590.87 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 508 | 591.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 519 | 591.23 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 615 | 591.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 620 | 591.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 672 | 591.94 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 686 | 592.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 825 | 596.76 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 847 | 597.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 858 | 598.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 9 |