Os06g0589900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0589900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 269.6 | 0.771 | 2.93 | -0.23 | 0.0901 | 7.12 | 0.911 | -24 | 0.0921 | 16.8 | 0.2052 | 27 | -- | -- |
| 280.61 | 0.786 | 2.87 | -0.093 | 0.0518 | -0.177 | 1.09 | -- | 0.0702 | 16.4 | 0.2052 | 27 | -- | -- |
| 271.46 | 0.767 | 2.92 | -0.236 | 0.115 | 7.45 | -- | -24.9 | 0.0995 | 14.6 | 0.2342 | 26 | -- | -- |
| 283.6 | 0.789 | 2.86 | -0.0817 | 0.0855 | -0.236 | -- | -- | 0.076 | 12.9 | 0.2052 | 27 | -- | -- |
| 272.23 | 0.768 | 2.92 | -0.235 | -- | 7.33 | -- | -24.6 | 0.095 | -- | 0.2385 | 26 | -- | -- |
| 280.65 | 0.785 | 2.87 | -0.0962 | 0.0532 | -- | 1.1 | -- | 0.0706 | 16.3 | -- | -- | -- | -- |
| 283.67 | 0.789 | 2.86 | -0.0856 | 0.0871 | -- | -- | -- | 0.0765 | 12.9 | -- | -- | -- | -- |
| 283.66 | 0.784 | 2.86 | -0.105 | -- | 0.356 | -- | -- | 0.078 | -- | 1.051 | 181 | -- | -- |
| 283.75 | 0.785 | 2.86 | -- | 0.0868 | -0.261 | -- | -- | 0.0846 | 13 | 0.9113 | 27 | -- | -- |
| 284.14 | 0.788 | 2.86 | -0.0889 | -- | -- | -- | -- | 0.0749 | -- | -- | -- | -- | -- |
| 283.86 | 0.788 | 2.86 | -- | 0.0885 | -- | -- | -- | 0.0861 | 13 | -- | -- | -- | -- |
| 283.08 | 0.784 | 2.86 | -- | -- | 0.748 | -- | -- | 0.0905 | -- | 1.531 | 213 | -- | -- |
| 284.35 | 0.787 | 2.86 | -- | -- | -- | -- | -- | 0.0847 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 258.44 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 2 | 258.97 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 12 | 22 |
| 3 | 259.41 | wind | 3.0 | 30 | > th | dose independent | rect. | 2 | 5 |
| 9 | 260.95 | radiation | 30.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 11 | 261.01 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 15 | 261.33 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 20 | 261.35 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 23 | 261.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 26 | 261.38 | radiation | 20.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 30 | 261.69 | wind | 3.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 33 | 261.79 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 36 | 261.95 | temperature | 25.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 39 | 262.01 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 40 | 262.02 | temperature | 15.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 41 | 262.04 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 42 | 262.06 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 44 | 262.11 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 48 | 262.18 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 50 | 262.25 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 53 | 262.30 | wind | 7.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 55 | 262.32 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 59 | 262.32 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 60 | 262.32 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 1 |
| 62 | 262.32 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 64 | 262.33 | humidity | 90.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 75 | 262.70 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 76 | 262.74 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 79 | 262.84 | wind | 9.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 83 | 262.95 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 1 | 7 |
| 95 | 262.95 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 107 | 262.96 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 1 | 5 |
| 111 | 262.96 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 1 | 5 |
| 137 | 263.17 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 179 | 263.40 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 23 |
| 180 | 263.40 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 182 | 263.61 | precipitation | 0.1 | 30 | > th | dose independent | sin | 5 | NA |
| 183 | 263.61 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 5 | NA |
| 254 | 263.89 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 255 | 263.89 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 267 | 263.90 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 7 |
| 298 | 264.04 | wind | 3.0 | 90 | > th | dose dependent | rect. | 2 | 7 |
| 302 | 264.09 | wind | 3.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 304 | 264.13 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 305 | 264.14 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 324 | 264.24 | temperature | 30.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 340 | 264.29 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 341 | 264.30 | precipitation | 0.1 | 30 | < th | dose independent | sin | 7 | NA |
| 344 | 264.30 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 7 | NA |
| 412 | 264.54 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 431 | 264.68 | wind | 7.0 | 270 | > th | dose independent | rect. | 2 | 2 |
| 452 | 264.90 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 500 | 265.15 | temperature | 30.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 565 | 265.51 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 586 | 265.63 | humidity | 70.0 | 10 | < th | dose independent | rect. | 18 | 1 |
| 621 | 265.86 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 714 | 266.61 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 4 | 7 |
| 769 | 266.85 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 808 | 267.08 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 816 | 267.09 | radiation | 40.0 | 30 | < th | dose independent | rect. | 19 | 22 |
| 837 | 267.11 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 3 | 1 |
| 842 | 267.13 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 894 | 267.31 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 5 |
| 900 | 267.31 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 954 | 267.57 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 963 | 267.60 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 21 |
| 967 | 267.60 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 974 | 267.65 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 1 |
| 988 | 267.65 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |