Os06g0587300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0587300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320.1 | 0.841 | 10.4 | 1.49 | 0.964 | -1.79 | -0.342 | -2.62 | 0.585 | 5.24 | 22.94 | 709 | -- | -- |
| 323.1 | 0.837 | 10.4 | 2 | 0.995 | -1.98 | 0.0674 | -- | 0.719 | 5.05 | 23.14 | 737 | -- | -- |
| 320.35 | 0.834 | 10.4 | 1.54 | 0.971 | -1.81 | -- | -2.39 | 0.599 | 5.2 | 22.96 | 715 | -- | -- |
| 323.04 | 0.837 | 10.4 | 2.03 | 0.966 | -2.02 | -- | -- | 0.728 | 5.02 | 23.2 | 734 | -- | -- |
| 342.16 | 0.862 | 10.4 | 1.84 | -- | -2.49 | -- | -1.46 | 0.732 | -- | 23.41 | 517 | -- | -- |
| 408.73 | 0.948 | 10.4 | 1.53 | 1.54 | -- | 0.61 | -- | 0.437 | 6.39 | -- | -- | -- | -- |
| 409.65 | 0.948 | 10.4 | 1.54 | 1.54 | -- | -- | -- | 0.435 | 6.37 | -- | -- | -- | -- |
| 342.46 | 0.862 | 10.4 | 2.09 | -- | -2.59 | -- | -- | 0.783 | -- | 23.58 | 521 | -- | -- |
| 423.75 | 0.959 | 10.4 | -- | 1.03 | -1.52 | -- | -- | 0.427 | 5.46 | 23.93 | 683 | -- | -- |
| 533.13 | 1.08 | 10.5 | 1.58 | -- | -- | -- | -- | 0.468 | -- | -- | -- | -- | -- |
| 471.91 | 1.02 | 10.5 | -- | 1.56 | -- | -- | -- | 0.264 | 6.32 | -- | -- | -- | -- |
| 450.92 | 0.989 | 10.5 | -- | -- | -2.23 | -- | -- | 0.441 | -- | 24.6 | 509 | -- | -- |
| 598.74 | 1.14 | 10.5 | -- | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 311.93 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 4 | 313.74 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 7 | 315.04 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 11 | 317.25 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 12 | 317.25 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 13 | 317.39 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 14 | 317.45 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 16 | 317.60 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 26 | 317.89 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 9 |
| 28 | 317.92 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 29 | 318.00 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 13 |
| 31 | 318.38 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 37 | 318.87 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 44 | 319.36 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 45 | 319.37 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 46 | 319.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 4 |
| 53 | 319.60 | wind | 9.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 59 | 319.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 12 |
| 62 | 319.89 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 69 | 320.18 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 75 | 320.42 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 79 | 320.49 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 87 | 320.81 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 91 | 320.86 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 96 | 321.12 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 98 | 321.13 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 20 |
| 114 | 321.66 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 123 | 321.86 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 126 | 321.87 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 132 | 322.00 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 136 | 322.04 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 16 |
| 151 | 322.21 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 152 | 322.22 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 180 | 322.66 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 192 | 322.77 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 193 | 322.78 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 198 | 322.83 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 17 |
| 206 | 322.89 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 207 | 322.90 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 221 | 323.02 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 238 | 323.10 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 262 | 323.24 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 20 |
| 347 | 323.93 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 14 | 21 |
| 373 | 324.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 393 | 324.35 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 8 |
| 420 | 324.53 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 22 |
| 436 | 324.66 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 454 | 324.77 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 475 | 324.93 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 503 | 325.13 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 511 | 325.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 516 | 325.20 | wind | 5.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 560 | 325.50 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 567 | 325.55 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 608 | 325.77 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 16 |
| 610 | 325.78 | wind | 7.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 626 | 325.86 | wind | 7.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 649 | 325.96 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 665 | 326.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 710 | 326.31 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 820 | 326.97 | temperature | 20.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 846 | 327.08 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 852 | 327.11 | wind | 5.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 869 | 327.18 | temperature | 20.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 886 | 327.24 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 16 |
| 891 | 327.27 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 907 | 327.35 | temperature | 10.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 917 | 327.40 | wind | 5.0 | 14400 | > th | dose independent | no | NA | NA |
| 973 | 327.67 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 987 | 327.70 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 22 |
| 988 | 327.70 | wind | 7.0 | 43200 | > th | dose dependent | sin | 16 | NA |
| 994 | 327.71 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 22 | 3 |