Os06g0586000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0586000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 446.26 | 0.993 | 8.81 | 1.14 | 1.88 | -2.23 | 0.739 | 0.239 | -0.00477 | 21.2 | 57.6 | 773 | -- | -- |
| 445.72 | 0.983 | 8.82 | 1.14 | 1.87 | -2.25 | 0.748 | -- | -0.00773 | 21.3 | 57.91 | 788 | -- | -- |
| 447.14 | 0.985 | 8.81 | 1.13 | 1.84 | -2.22 | -- | 0.584 | -0.00242 | 21.3 | 57 | 785 | -- | -- |
| 447.58 | 0.985 | 8.81 | 1.12 | 1.84 | -2.15 | -- | -- | 0.0114 | 21.3 | 56.61 | 788 | -- | -- |
| 575.01 | 1.12 | 8.76 | 1.23 | -- | -1.91 | -- | 0.85 | -0.0473 | -- | 56.48 | 1370 | -- | -- |
| 584.06 | 1.13 | 8.72 | 0.79 | 1.34 | -- | 0.026 | -- | 0.343 | 21.5 | -- | -- | -- | -- |
| 584.06 | 1.13 | 8.72 | 0.789 | 1.34 | -- | -- | -- | 0.343 | 21.5 | -- | -- | -- | -- |
| 575.47 | 1.12 | 8.77 | 1.18 | -- | -1.85 | -- | -- | -0.0353 | -- | 56.23 | 1372 | -- | -- |
| 479.54 | 1.02 | 8.84 | -- | 1.82 | -2.07 | -- | -- | -0.1 | 21.4 | 57.04 | 789 | -- | -- |
| 689.42 | 1.23 | 8.69 | 0.798 | -- | -- | -- | -- | 0.339 | -- | -- | -- | -- | -- |
| 600.46 | 1.15 | 8.74 | -- | 1.34 | -- | -- | -- | 0.255 | 21.6 | -- | -- | -- | -- |
| 610.97 | 1.15 | 8.79 | -- | -- | -1.66 | -- | -- | -0.125 | -- | 56.53 | 1375 | -- | -- |
| 706.22 | 1.24 | 8.71 | -- | -- | -- | -- | -- | 0.251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 433.98 | humidity | 70 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 4 | 436.18 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 9 |
| 5 | 436.40 | humidity | 70 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 19 | 438.04 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 17 |
| 21 | 438.32 | humidity | 60 | 720 | < th | dose independent | rect. | 15 | 19 |
| 23 | 438.66 | humidity | 60 | 720 | > th | dose independent | sin | 14 | NA |
| 28 | 439.28 | humidity | 60 | 720 | < th | dose independent | rect. | 15 | 4 |
| 30 | 439.51 | humidity | 60 | 720 | < th | dose independent | sin | 14 | NA |
| 31 | 439.60 | humidity | 70 | 720 | < th | dose dependent | sin | 12 | NA |
| 104 | 445.35 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 20 |
| 105 | 445.40 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 1 |
| 134 | 447.11 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 12 |
| 181 | 449.68 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 15 |
| 219 | 450.66 | humidity | 60 | 720 | < th | dose independent | rect. | 11 | 8 |
| 241 | 451.32 | humidity | 60 | 720 | > th | dose independent | rect. | 5 | 18 |
| 254 | 451.95 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 23 |
| 289 | 452.41 | humidity | 60 | 720 | > th | dose independent | rect. | 1 | 23 |
| 373 | 454.16 | humidity | 60 | 720 | < th | dose independent | no | NA | NA |
| 452 | 454.18 | humidity | 60 | 720 | > th | dose independent | rect. | 3 | 23 |
| 497 | 454.96 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 501 | 455.14 | humidity | 60 | 720 | > th | dose independent | no | NA | NA |
| 520 | 455.76 | temperature | 30 | 720 | > th | dose dependent | sin | 11 | NA |
| 542 | 456.35 | humidity | 70 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 603 | 457.30 | temperature | 30 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 615 | 457.32 | humidity | 60 | 720 | > th | dose independent | rect. | 20 | 23 |
| 622 | 457.60 | humidity | 70 | 720 | < th | dose dependent | no | NA | NA |
| 623 | 457.60 | humidity | 70 | 720 | < th | dose dependent | rect. | 6 | 14 |
| 708 | 457.83 | temperature | 30 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 955 | 461.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 13 |