Os06g0585900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0585900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.84 | 0.499 | 2.76 | -0.203 | 0.00393 | 7.54 | -0.226 | -47.5 | 0.044 | 17.1 | 34.28 | 44 | -- | -- |
| 115.44 | 0.5 | 2.73 | 0.0528 | 0.0214 | 2.95 | -0.164 | -- | 0.0436 | 15.9 | 35.4 | 35 | -- | -- |
| 112.54 | 0.494 | 2.76 | -0.229 | 0.0291 | 7.02 | -- | -44.2 | 0.0445 | 12.7 | 34.19 | 51 | -- | -- |
| 115.49 | 0.501 | 2.73 | 0.0415 | 0.0322 | 2.9 | -- | -- | 0.0403 | 12.5 | 35.01 | 34 | -- | -- |
| 112.57 | 0.494 | 2.77 | -0.236 | -- | 6.97 | -- | -43.7 | 0.0436 | -- | 34.22 | 53 | -- | -- |
| 123.81 | 0.522 | 2.73 | 0.0529 | 0.0547 | -- | -0.0719 | -- | 0.0344 | 14.1 | -- | -- | -- | -- |
| 123.83 | 0.521 | 2.73 | 0.0507 | 0.0547 | -- | -- | -- | 0.0338 | 13.4 | -- | -- | -- | -- |
| 115.56 | 0.501 | 2.73 | 0.0411 | -- | 2.91 | -- | -- | 0.04 | -- | 35.04 | 35 | -- | -- |
| 115.54 | 0.501 | 2.73 | -- | 0.0316 | 2.9 | -- | -- | 0.0359 | 12.4 | 35.03 | 33 | -- | -- |
| 124.01 | 0.52 | 2.73 | 0.0485 | -- | -- | -- | -- | 0.0327 | -- | -- | -- | -- | -- |
| 123.89 | 0.521 | 2.73 | -- | 0.0538 | -- | -- | -- | 0.0282 | 13.3 | -- | -- | -- | -- |
| 115.6 | 0.501 | 2.73 | -- | -- | 2.91 | -- | -- | 0.0354 | -- | 35.06 | 33 | -- | -- |
| 124.07 | 0.52 | 2.74 | -- | -- | -- | -- | -- | 0.0273 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.88 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 4 | 115.82 | humidity | 90.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 12 | 115.82 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 7 |
| 20 | 115.82 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 28 | 115.82 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 7 |
| 36 | 115.84 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 1 |
| 39 | 115.84 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 40 | 115.84 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 44 | 115.85 | humidity | 90.0 | 90 | > th | dose independent | rect. | 13 | 1 |
| 50 | 115.85 | humidity | 60.0 | 30 | < th | dose dependent | rect. | 13 | 3 |
| 115 | 116.10 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 13 | 3 |
| 163 | 117.19 | radiation | 10.0 | 10 | > th | dose independent | rect. | 13 | 19 |
| 175 | 117.41 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 185 | 117.63 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 193 | 117.83 | humidity | 60.0 | 90 | < th | dose independent | rect. | 13 | 3 |
| 200 | 117.96 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 8 | 5 |
| 214 | 118.01 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 10 | 3 |
| 237 | 118.08 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 279 | 118.15 | temperature | 30.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 280 | 118.16 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 284 | 118.17 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 13 | 19 |
| 307 | 118.37 | humidity | 90.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 324 | 118.41 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 13 | 2 |
| 361 | 118.62 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 12 |
| 398 | 118.84 | radiation | 20.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 420 | 118.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 8 | 1 |
| 427 | 118.95 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 3 |
| 428 | 118.95 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 442 | 119.05 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 4 |
| 446 | 119.09 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 453 | 119.12 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 454 | 119.12 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 457 | 119.14 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 593 | 119.30 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 14 |
| 609 | 119.32 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 695 | 119.46 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 707 | 119.51 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 722 | 119.52 | radiation | 20.0 | 30 | < th | dose independent | sin | 13 | NA |
| 728 | 119.53 | radiation | 10.0 | 30 | > th | dose independent | rect. | 13 | 3 |
| 732 | 119.55 | radiation | 20.0 | 30 | > th | dose independent | sin | 13 | NA |
| 734 | 119.55 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 762 | 119.59 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 13 | 19 |
| 766 | 119.61 | temperature | 25.0 | 90 | > th | dose independent | rect. | 13 | 2 |
| 770 | 119.64 | temperature | 25.0 | 30 | > th | dose independent | rect. | 13 | 8 |
| 771 | 119.64 | temperature | 30.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 774 | 119.65 | wind | 7.0 | 30 | < th | dose independent | rect. | 13 | 19 |
| 777 | 119.68 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 786 | 119.70 | temperature | 30.0 | 90 | < th | dose independent | rect. | 8 | 11 |
| 788 | 119.70 | wind | 7.0 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 790 | 119.71 | wind | 7.0 | 720 | > th | dose dependent | rect. | 19 | 9 |
| 799 | 119.72 | wind | 7.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 843 | 119.81 | radiation | 30.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 848 | 119.82 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 13 | 2 |
| 857 | 119.84 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 9 |
| 876 | 119.87 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 13 | 3 |
| 907 | 119.92 | wind | 7.0 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 908 | 119.93 | temperature | 25.0 | 10 | > th | dose independent | rect. | 13 | 3 |
| 912 | 119.93 | wind | 7.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 916 | 119.94 | temperature | 25.0 | 90 | < th | dose independent | rect. | 6 | 2 |
| 922 | 119.94 | wind | 7.0 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 928 | 119.95 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 5 |
| 929 | 119.95 | radiation | 1.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 940 | 119.96 | wind | 7.0 | 720 | > th | dose independent | rect. | 19 | 13 |
| 949 | 119.98 | radiation | 20.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 950 | 119.98 | wind | 7.0 | 720 | > th | dose independent | rect. | 21 | 11 |
| 972 | 119.99 | temperature | 25.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 980 | 119.99 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 22 |
| 984 | 119.99 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 13 | 8 |
| 986 | 120.00 | wind | 7.0 | 720 | > th | dose independent | rect. | 19 | 10 |