Os06g0582400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0582400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.94 | 0.484 | 8.69 | -0.227 | 0.658 | 0.829 | -1.82 | 1.22 | -0.097 | 2.34 | 20.6 | 1141 | -- | -- |
| 108.89 | 0.486 | 8.73 | -0.409 | 0.678 | 0.702 | -1.4 | -- | -0.137 | 2.09 | 21.1 | 1118 | -- | -- |
| 116.82 | 0.503 | 8.69 | -0.217 | 0.668 | 0.85 | -- | 1.14 | -0.0997 | 1.64 | 20.8 | 1317 | -- | -- |
| 117.31 | 0.504 | 8.73 | -0.43 | 0.648 | 0.703 | -- | -- | -0.156 | 1.77 | 21 | 1102 | -- | -- |
| 140.91 | 0.553 | 8.71 | -0.322 | -- | 0.881 | -- | 0.559 | -0.148 | -- | 21.04 | 999 | -- | -- |
| 121.6 | 0.517 | 8.69 | -0.188 | 0.725 | -- | -1.67 | -- | 0.0143 | 2.19 | -- | -- | -- | -- |
| 131.38 | 0.537 | 8.69 | -0.139 | 0.722 | -- | -- | -- | 0.0256 | 1.6 | -- | -- | -- | -- |
| 141.69 | 0.554 | 8.73 | -0.423 | -- | 0.809 | -- | -- | -0.177 | -- | 21.2 | 984 | -- | -- |
| 121.28 | 0.513 | 8.71 | -- | 0.648 | 0.547 | -- | -- | -0.0834 | 1.88 | 21.25 | 962 | -- | -- |
| 163.21 | 0.597 | 8.68 | -0.11 | -- | -- | -- | -- | 0.0415 | -- | -- | -- | -- | -- |
| 131.89 | 0.537 | 8.69 | -- | 0.719 | -- | -- | -- | 0.0411 | 1.6 | -- | -- | -- | -- |
| 146.05 | 0.563 | 8.72 | -- | -- | 0.698 | -- | -- | -0.125 | -- | 21.3 | 949 | -- | -- |
| 163.52 | 0.597 | 8.68 | -- | -- | -- | -- | -- | 0.0537 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.49 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 22 |
| 6 | 105.31 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 13 | 15 |
| 9 | 105.51 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 13 | 16 |
| 11 | 105.67 | temperature | 10 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 13 | 105.80 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 14 | 105.81 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 22 |
| 15 | 105.82 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 19 | 105.88 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 15 |
| 22 | 105.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 35 | 106.03 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 19 |
| 42 | 106.08 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 44 | 106.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 9 |
| 58 | 106.20 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 76 | 106.27 | temperature | 20 | 720 | < th | dose independent | sin | 11 | NA |
| 77 | 106.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 82 | 106.30 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 90 | 106.31 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 91 | 106.32 | humidity | 80 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 102 | 106.35 | temperature | 20 | 720 | < th | dose independent | rect. | 12 | 21 |
| 110 | 106.37 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 22 |
| 114 | 106.38 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 16 |
| 120 | 106.39 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 127 | 106.40 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 148 | 106.45 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 155 | 106.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 156 | 106.48 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 157 | 106.48 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 13 |
| 165 | 106.49 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 23 |
| 169 | 106.50 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 175 | 106.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 181 | 106.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 14 |
| 185 | 106.54 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 203 | 106.59 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 19 |
| 259 | 106.76 | temperature | 20 | 1440 | > th | dose independent | sin | 14 | NA |
| 332 | 106.92 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 345 | 106.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 401 | 107.07 | humidity | 80 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 426 | 107.13 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 23 |
| 485 | 107.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 8 |
| 536 | 107.32 | temperature | 20 | 720 | < th | dose independent | sin | 22 | NA |
| 724 | 107.59 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 8 |
| 729 | 107.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 811 | 107.67 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 922 | 107.83 | wind | 5 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 948 | 107.86 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 954 | 107.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 5 |