Os06g0578400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0578400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 317.04 | 0.837 | 4.65 | -3.62 | 0.37 | -0.978 | -0.099 | -3.09 | 0.569 | 9.66 | 1.45 | 4408 | -- | -- |
| 324.05 | 0.838 | 4.59 | -3.03 | 0.411 | -1.03 | -0.262 | -- | 0.659 | 9.81 | 2.1 | 4456 | -- | -- |
| 317.04 | 0.829 | 4.65 | -3.62 | 0.374 | -0.978 | -- | -3.09 | 0.568 | 9.67 | 1.45 | 4410 | -- | -- |
| 323.72 | 0.838 | 4.59 | -3 | 0.395 | -0.955 | -- | -- | 0.74 | 10.1 | 2.099 | 4447 | -- | -- |
| 324.26 | 0.839 | 4.64 | -3.63 | -- | -0.916 | -- | -3.09 | 0.581 | -- | 1.67 | 5838 | -- | -- |
| 341.03 | 0.866 | 4.64 | -3.12 | 0.282 | -- | -0.43 | -- | 0.511 | 9.33 | -- | -- | -- | -- |
| 341.61 | 0.866 | 4.64 | -3.13 | 0.289 | -- | -- | -- | 0.509 | 8.83 | -- | -- | -- | -- |
| 327.04 | 0.842 | 4.6 | -2.97 | -- | -0.868 | -- | -- | 0.758 | -- | 3.009 | 8289 | -- | -- |
| 374.4 | 0.901 | 4.6 | -- | 0.235 | -2.28 | -- | -- | 1.41 | 9.16 | 7.287e-06 | 47520 | -- | -- |
| 346.38 | 0.87 | 4.65 | -3.13 | -- | -- | -- | -- | 0.512 | -- | -- | -- | -- | -- |
| 600.45 | 1.15 | 4.56 | -- | 0.289 | -- | -- | -- | 0.858 | 9.65 | -- | -- | -- | -- |
| 364.68 | 0.889 | 4.42 | -- | -- | -2.42 | -- | -- | 1.53 | -- | 0.009401 | 47520 | -- | -- |
| 605.4 | 1.15 | 4.57 | -- | -- | -- | -- | -- | 0.859 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 311.93 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 18 | 312.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 19 | 312.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 23 | 312.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 24 | 312.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 48 | 313.19 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 50 | 313.24 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 56 | 313.33 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 57 | 313.34 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 58 | 313.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 59 | 313.36 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 60 | 313.38 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 110 | 313.72 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 114 | 313.76 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 135 | 313.97 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 188 | 314.19 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 195 | 314.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 198 | 314.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 199 | 314.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 218 | 314.30 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 235 | 314.35 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 267 | 314.45 | radiation | 40.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 289 | 314.52 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 291 | 314.52 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 293 | 314.53 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 321 | 314.54 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 334 | 314.55 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 339 | 314.55 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 389 | 314.64 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 393 | 314.65 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 394 | 314.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 13 |
| 450 | 314.74 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 457 | 314.76 | temperature | 25.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 462 | 314.77 | temperature | 25.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 484 | 314.80 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 486 | 314.81 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 494 | 314.83 | temperature | 30.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 497 | 314.83 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 518 | 314.84 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 528 | 314.85 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 532 | 314.86 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 534 | 314.87 | temperature | 30.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 666 | 314.98 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 11 | 14 |
| 713 | 315.00 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 731 | 315.00 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 832 | 315.05 | temperature | 30.0 | 43200 | < th | dose independent | no | NA | NA |
| 851 | 315.05 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 863 | 315.05 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 4 | 21 |
| 964 | 315.08 | temperature | 30.0 | 43200 | > th | dose independent | no | NA | NA |
| 965 | 315.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |