Os06g0578100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : von Willebrand factor, type A domain containing protein.
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Os06g0578100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : von Willebrand factor, type A domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 233.61 | 0.718 | 6.1 | 0.179 | 1.16 | -0.834 | 1.5 | -0.824 | 0.0444 | 19.3 | 21.5 | 825 | -- | -- |
| 235.02 | 0.714 | 6.07 | 0.381 | 1.16 | -0.77 | 1.19 | -- | 0.0997 | 19.2 | 21.76 | 791 | -- | -- |
| 238.82 | 0.72 | 6.09 | 0.186 | 1.16 | -0.789 | -- | -0.511 | 0.0603 | 19.2 | 21.72 | 861 | -- | -- |
| 238.61 | 0.719 | 6.07 | 0.322 | 1.17 | -0.735 | -- | -- | 0.0994 | 19.1 | 21.98 | 752 | -- | -- |
| 296.13 | 0.801 | 6.06 | 0.227 | -- | -0.807 | -- | -0.515 | 0.0757 | -- | 22.1 | 1485 | -- | -- |
| 257.73 | 0.753 | 6.12 | 0.0936 | 1.05 | -- | 1.13 | -- | -0.135 | 18.9 | -- | -- | -- | -- |
| 260.94 | 0.756 | 6.12 | 0.0749 | 1.06 | -- | -- | -- | -0.132 | 18.7 | -- | -- | -- | -- |
| 297.67 | 0.804 | 6.04 | 0.344 | -- | -0.784 | -- | -- | 0.101 | -- | 22.08 | 1472 | -- | -- |
| 241.14 | 0.723 | 6.08 | -- | 1.15 | -0.665 | -- | -- | 0.0497 | 19.1 | 22 | 758 | -- | -- |
| 319.36 | 0.835 | 6.09 | 0.0509 | -- | -- | -- | -- | -0.152 | -- | -- | -- | -- | -- |
| 261.09 | 0.756 | 6.12 | -- | 1.06 | -- | -- | -- | -0.14 | 18.8 | -- | -- | -- | -- |
| 300.49 | 0.807 | 6.05 | -- | -- | -0.696 | -- | -- | 0.038 | -- | 22 | 1484 | -- | -- |
| 319.43 | 0.834 | 6.1 | -- | -- | -- | -- | -- | -0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 226.09 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 3 | 227.91 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 4 | 228.09 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 5 | 228.10 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 21 | 19 |
| 11 | 228.59 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 21 |
| 12 | 228.63 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 16 | 229.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 17 | 229.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 20 | 229.18 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 28 | 229.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 29 | 229.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 31 | 229.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 36 | 229.82 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 41 | 229.90 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 45 | 230.02 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 55 | 230.29 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 64 | 230.50 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 11 |
| 65 | 230.53 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 79 | 230.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 83 | 230.85 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 95 | 231.08 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 110 | 231.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 125 | 231.39 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 143 | 231.61 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 151 | 231.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 159 | 231.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 163 | 231.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 167 | 231.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 14 |
| 176 | 231.88 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 183 | 231.92 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 196 | 232.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 197 | 232.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 199 | 232.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 201 | 232.14 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 209 | 232.21 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 216 | 232.28 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 218 | 232.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 11 |
| 219 | 232.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 234 | 232.39 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 252 | 232.55 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 254 | 232.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 255 | 232.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 256 | 232.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 265 | 232.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 267 | 232.65 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 271 | 232.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 278 | 232.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 283 | 232.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 284 | 232.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 285 | 232.80 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 322 | 233.03 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 327 | 233.05 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 365 | 233.22 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 9 |
| 367 | 233.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 379 | 233.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 382 | 233.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 384 | 233.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 386 | 233.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 395 | 233.36 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 426 | 233.53 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 433 | 233.57 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 434 | 233.58 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 455 | 233.66 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 473 | 233.75 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 492 | 233.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 498 | 233.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 499 | 233.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 503 | 233.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 508 | 233.86 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 511 | 233.87 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 525 | 233.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 526 | 233.92 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 529 | 233.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 592 | 234.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 658 | 234.37 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 662 | 234.38 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 697 | 234.51 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 21 |
| 703 | 234.55 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 711 | 234.59 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 744 | 234.70 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 747 | 234.71 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 10 |
| 748 | 234.71 | temperature | 25.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 750 | 234.72 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 755 | 234.73 | humidity | 80.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 774 | 234.77 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 802 | 234.84 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 20 |
| 808 | 234.87 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 14 |
| 814 | 234.90 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 816 | 234.91 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 823 | 234.92 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 6 | 10 |
| 826 | 234.93 | temperature | 10.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 830 | 234.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 835 | 234.95 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 849 | 235.01 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 897 | 235.14 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 905 | 235.17 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 927 | 235.25 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 941 | 235.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 967 | 235.37 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 983 | 235.42 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 6 |
| 997 | 235.47 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |