Os06g0574700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Apple-like domain containing protein.
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Os06g0574700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Apple-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.11 | 0.426 | 6.16 | -0.0816 | 0.506 | -2.5 | 0.0452 | 1.31 | -0.148 | 10.2 | 27.7 | 1586 | -- | -- |
| 84.43 | 0.428 | 6.15 | -0.0111 | 0.439 | -2.75 | 0.0733 | -- | -0.119 | 10.1 | 25.44 | 1616 | -- | -- |
| 82.1 | 0.422 | 6.16 | -0.0764 | 0.505 | -2.5 | -- | 1.29 | -0.15 | 10.2 | 27.6 | 1607 | -- | -- |
| 83.88 | 0.427 | 6.13 | 0.027 | 0.481 | -2.68 | -- | -- | -0.123 | 10.5 | 26.05 | 1549 | -- | -- |
| 97.63 | 0.46 | 6.17 | -0.0777 | -- | -2.49 | -- | 1.3 | -0.141 | -- | 27.44 | 1576 | -- | -- |
| 179.37 | 0.628 | 5.99 | 1 | 0.493 | -- | -0.0527 | -- | 0.494 | 10.1 | -- | -- | -- | -- |
| 179.38 | 0.627 | 5.99 | 0.998 | 0.494 | -- | -- | -- | 0.494 | 10.2 | -- | -- | -- | -- |
| 98.27 | 0.462 | 6.14 | 0.168 | -- | -2.67 | -- | -- | -0.0744 | -- | 25.14 | 1586 | -- | -- |
| 83.96 | 0.427 | 6.13 | -- | 0.499 | -2.7 | -- | -- | -0.13 | 10.2 | 26.35 | 1620 | -- | -- |
| 194.14 | 0.651 | 6.01 | 0.991 | -- | -- | -- | -- | 0.493 | -- | -- | -- | -- | -- |
| 205.63 | 0.671 | 6.02 | -- | 0.489 | -- | -- | -- | 0.383 | 10 | -- | -- | -- | -- |
| 98.9 | 0.463 | 6.14 | -- | -- | -2.76 | -- | -- | -0.106 | -- | 25.02 | 1593 | -- | -- |
| 220.06 | 0.692 | 6.03 | -- | -- | -- | -- | -- | 0.383 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 13 |
| 24 | 80.64 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 73 | 81.31 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 90 | 81.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 13 |
| 119 | 81.77 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 150 | 81.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 194 | 82.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 207 | 82.20 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 216 | 82.22 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 218 | 82.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 277 | 82.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 333 | 82.65 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 354 | 82.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 406 | 82.90 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 17 |
| 407 | 82.91 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 438 | 82.98 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 455 | 82.99 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 496 | 83.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 522 | 83.16 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 523 | 83.16 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 526 | 83.17 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 537 | 83.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 568 | 83.24 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 598 | 83.32 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 608 | 83.32 | humidity | 50 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 618 | 83.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 624 | 83.37 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 637 | 83.40 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 661 | 83.45 | temperature | 20 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 700 | 83.52 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 12 |
| 711 | 83.54 | humidity | 50 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 752 | 83.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 768 | 83.62 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 812 | 83.68 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 828 | 83.70 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 863 | 83.76 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 879 | 83.78 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 903 | 83.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 904 | 83.82 | humidity | 50 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 945 | 83.88 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 16 |