Os06g0571400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Elongation factor 1 gamma-like protein (Fragment).
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Os06g0571400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Elongation factor 1 gamma-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.04 | 0.415 | 12.5 | 0.288 | 1.35 | -0.881 | 0.571 | 0.114 | 0.0163 | 18.2 | 39.5 | 65 | -- | -- |
| 78.06 | 0.412 | 12.5 | 0.286 | 1.35 | -0.89 | 0.577 | -- | 0.016 | 18.2 | 39.5 | 64 | -- | -- |
| 78.79 | 0.413 | 12.5 | 0.285 | 1.35 | -0.857 | -- | 0.155 | 0.0264 | 18.1 | 39.49 | 61 | -- | -- |
| 78.83 | 0.414 | 12.5 | 0.276 | 1.36 | -0.856 | -- | -- | 0.0241 | 18.1 | 39.5 | 59 | -- | -- |
| 97.51 | 0.46 | 12.5 | 0.0859 | -- | -1.57 | -- | 1.26 | -0.107 | -- | 2.049 | 644 | -- | -- |
| 92.41 | 0.451 | 12.5 | 0.229 | 1.41 | -- | 0.145 | -- | 0.0393 | 17.4 | -- | -- | -- | -- |
| 92.46 | 0.45 | 12.5 | 0.229 | 1.41 | -- | -- | -- | 0.0401 | 17.4 | -- | -- | -- | -- |
| 95.58 | 0.455 | 12.5 | 0.143 | -- | -1.61 | -- | -- | -0.0808 | -- | 2.047 | 669 | -- | -- |
| 80.82 | 0.419 | 12.5 | -- | 1.35 | -0.829 | -- | -- | -0.00202 | 18.1 | 39.49 | 59 | -- | -- |
| 196.23 | 0.655 | 12.5 | 0.181 | -- | -- | -- | -- | 0.00508 | -- | -- | -- | -- | -- |
| 93.85 | 0.453 | 12.5 | -- | 1.41 | -- | -- | -- | 0.0145 | 17.4 | -- | -- | -- | -- |
| 96.15 | 0.457 | 12.5 | -- | -- | -1.59 | -- | -- | -0.0735 | -- | 2.043 | 664 | -- | -- |
| 197.1 | 0.655 | 12.5 | -- | -- | -- | -- | -- | -0.015 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.37 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 2 | 72.38 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 3 | 72.84 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 22 |
| 6 | 72.92 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 7 | 73.07 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 12 | 73.35 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 24 | 73.45 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 27 | 73.54 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 30 | 73.65 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 35 | 73.80 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 36 | 73.87 | radiation | 40.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 44 | 74.13 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 62 | 74.33 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 67 | 74.37 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 84 | 74.63 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 85 | 74.66 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 123 | 74.83 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 128 | 74.86 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 136 | 74.91 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 145 | 75.03 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 157 | 75.12 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 161 | 75.14 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 163 | 75.16 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 165 | 75.16 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 171 | 75.19 | radiation | 40.0 | 90 | < th | dose independent | sin | 5 | NA |
| 183 | 75.20 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 19 |
| 184 | 75.20 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 188 | 75.22 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 192 | 75.25 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 196 | 75.28 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 201 | 75.29 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 204 | 75.32 | radiation | 20.0 | 270 | < th | dose independent | sin | 7 | NA |
| 208 | 75.33 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 217 | 75.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 222 | 75.38 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 223 | 75.38 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 226 | 75.42 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 229 | 75.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 231 | 75.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 243 | 75.49 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 246 | 75.50 | wind | 7.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 251 | 75.53 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 253 | 75.53 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 254 | 75.53 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 255 | 75.53 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 5 |
| 256 | 75.53 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 257 | 75.53 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 259 | 75.54 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 6 |
| 262 | 75.56 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 281 | 75.62 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 289 | 75.65 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 291 | 75.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 297 | 75.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 301 | 75.67 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 325 | 75.72 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 360 | 75.80 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 363 | 75.81 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 364 | 75.81 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 367 | 75.81 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 368 | 75.81 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 386 | 75.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 17 |
| 397 | 75.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 401 | 75.84 | radiation | 40.0 | 90 | < th | dose independent | sin | 8 | NA |
| 409 | 75.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 7 |
| 410 | 75.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 417 | 75.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 419 | 75.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 424 | 75.95 | radiation | 1.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 444 | 75.98 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 447 | 75.98 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 20 |
| 452 | 76.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 459 | 76.00 | humidity | 50.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 466 | 76.03 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 469 | 76.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 471 | 76.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 472 | 76.06 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 474 | 76.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 475 | 76.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 477 | 76.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 484 | 76.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 485 | 76.08 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 488 | 76.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 501 | 76.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 6 |
| 503 | 76.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 507 | 76.13 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 508 | 76.13 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 17 |
| 520 | 76.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 531 | 76.17 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 532 | 76.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 570 | 76.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 10 |
| 576 | 76.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 585 | 76.27 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 599 | 76.30 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 607 | 76.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 621 | 76.35 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 627 | 76.37 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 638 | 76.39 | radiation | 40.0 | 270 | < th | dose independent | sin | 10 | NA |
| 649 | 76.40 | humidity | 50.0 | 10 | > th | dose independent | rect. | 16 | 17 |
| 655 | 76.41 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 675 | 76.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 685 | 76.45 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 701 | 76.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 705 | 76.50 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 714 | 76.51 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 719 | 76.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 23 |
| 722 | 76.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 735 | 76.56 | radiation | 1.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 739 | 76.57 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 788 | 76.66 | humidity | 60.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 789 | 76.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 792 | 76.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 795 | 76.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 805 | 76.69 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 829 | 76.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 837 | 76.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 845 | 76.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 847 | 76.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 868 | 76.77 | radiation | 40.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 883 | 76.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 20 |
| 885 | 76.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 20 |
| 938 | 76.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 945 | 76.90 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 12 |
| 963 | 76.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 971 | 76.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 999 | 77.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 14 |