Os06g0569500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ent-kaurene oxidase 1 (Fragment).
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Os06g0569500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ent-kaurene oxidase 1 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.25 | 0.468 | 11.1 | 0.789 | 0.198 | -2.9 | -1.12 | -4.24 | 0.409 | 17.7 | 0.8498 | 1441 | -- | -- |
| 103.67 | 0.474 | 11.2 | 0.42 | 0.2 | -2.03 | -1.18 | -- | 0.32 | 17.8 | 2.042 | 1440 | -- | -- |
| 101.77 | 0.47 | 11.1 | 0.783 | 0.205 | -3.08 | -- | -4.63 | 0.392 | 18.9 | 0.7112 | 1447 | -- | -- |
| 105.95 | 0.479 | 11.2 | 0.427 | 0.286 | -2.14 | -- | -- | 0.319 | 21.2 | 2.092 | 1471 | -- | -- |
| 103.93 | 0.475 | 11.1 | 0.776 | -- | -3.01 | -- | -4.49 | 0.387 | -- | 0.7357 | 1442 | -- | -- |
| 152.9 | 0.58 | 11.1 | 0.851 | 0.157 | -- | -1.31 | -- | 0.612 | 17.1 | -- | -- | -- | -- |
| 156.94 | 0.587 | 11.1 | 0.849 | 0.166 | -- | -- | -- | 0.605 | 18.7 | -- | -- | -- | -- |
| 108.74 | 0.486 | 11.2 | 0.427 | -- | -2.02 | -- | -- | 0.321 | -- | 2.1 | 1445 | -- | -- |
| 110.13 | 0.489 | 11.2 | -- | 0.294 | -2.37 | -- | -- | 0.269 | 21.4 | 1.739 | 1471 | -- | -- |
| 158.38 | 0.588 | 11.1 | 0.845 | -- | -- | -- | -- | 0.602 | -- | -- | -- | -- | -- |
| 175.94 | 0.62 | 11.1 | -- | 0.156 | -- | -- | -- | 0.511 | 19 | -- | -- | -- | -- |
| 112.96 | 0.495 | 11.2 | -- | -- | -2.22 | -- | -- | 0.269 | -- | 1.775 | 1442 | -- | -- |
| 177.21 | 0.621 | 11.1 | -- | -- | -- | -- | -- | 0.508 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.06 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 3 | 93.31 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 11 |
| 4 | 93.71 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 18 |
| 10 | 93.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 14 |
| 26 | 94.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 33 | 96.51 | radiation | 1 | 1440 | < th | dose dependent | sin | 2 | NA |
| 49 | 98.39 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 52 | 98.52 | radiation | 1 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 53 | 98.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 61 | 99.00 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 64 | 99.08 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 66 | 99.10 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 71 | 99.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 18 |
| 77 | 99.34 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 90 | 99.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 93 | 99.47 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 95 | 99.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 136 | 99.82 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 155 | 100.43 | radiation | 1 | 1440 | > th | dose independent | sin | 1 | NA |
| 172 | 100.98 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 183 | 101.04 | radiation | 1 | 1440 | < th | dose independent | sin | 1 | NA |
| 187 | 101.08 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 243 | 101.33 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 11 |
| 246 | 101.36 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 254 | 101.45 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 11 |
| 258 | 101.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 261 | 101.51 | radiation | 1 | 1440 | < th | dose independent | rect. | 22 | 18 |
| 276 | 101.59 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 285 | 101.65 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 308 | 101.77 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 311 | 101.82 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 314 | 101.84 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 20 |
| 326 | 101.87 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 333 | 101.93 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 343 | 101.97 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 345 | 101.97 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 394 | 102.25 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 404 | 102.28 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 405 | 102.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 409 | 102.31 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 412 | 102.32 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 416 | 102.35 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 417 | 102.35 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 455 | 103.03 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 458 | 103.05 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 21 |
| 459 | 103.06 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 461 | 103.08 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 465 | 103.11 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 472 | 103.17 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 494 | 103.25 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 498 | 103.31 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 499 | 103.35 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 509 | 103.44 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 13 |
| 514 | 103.48 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 516 | 103.50 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 20 |
| 519 | 103.51 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 553 | 103.68 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 574 | 103.77 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 620 | 104.03 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 673 | 104.35 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 696 | 104.40 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 716 | 104.47 | humidity | 90 | 43200 | > th | dose dependent | sin | 14 | NA |
| 742 | 104.55 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 747 | 104.56 | radiation | 1 | 14400 | < th | dose dependent | rect. | 12 | 17 |
| 775 | 104.65 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 824 | 104.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 859 | 104.85 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 868 | 104.88 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 16 |
| 886 | 104.94 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 894 | 104.97 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 900 | 104.97 | radiation | 1 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 914 | 104.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 23 |