Os06g0568800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0568800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.37 | 0.459 | 2.92 | 0.184 | 0.123 | 5.07 | -0.0444 | 17.6 | 0.0918 | 15.3 | 995 | 5664 | -- | -- |
| 104.11 | 0.479 | 2.88 | 0.0127 | 0.122 | -0.0205 | -0.00937 | -- | 0.07 | 15 | 994.7 | 3251 | -- | -- |
| 95.36 | 0.455 | 2.92 | 0.186 | 0.12 | 5.14 | -- | 17.8 | 0.0894 | 15.2 | 995 | 6073 | -- | -- |
| 104.06 | 0.475 | 2.88 | 0.00654 | 0.122 | -0.0957 | -- | -- | 0.068 | 15 | 993.6 | 8524 | -- | -- |
| 96.13 | 0.457 | 2.93 | 0.195 | -- | 5.95 | -- | 20.6 | 0.0776 | -- | 995 | 5607 | -- | -- |
| 104.11 | 0.478 | 2.88 | 0.0126 | 0.122 | -- | -0.00981 | -- | 0.07 | 15 | -- | -- | -- | -- |
| 104.11 | 0.478 | 2.88 | 0.0124 | 0.122 | -- | -- | -- | 0.0699 | 15 | -- | -- | -- | -- |
| 104.65 | 0.476 | 2.88 | -0.00836 | -- | 0.244 | -- | -- | 0.0745 | -- | 998.5 | 1156 | -- | -- |
| 104.07 | 0.475 | 2.88 | -- | 0.122 | -0.0975 | -- | -- | 0.0672 | 15 | 993.7 | 8427 | -- | -- |
| 104.96 | 0.479 | 2.88 | 0.00715 | -- | -- | -- | -- | 0.0668 | -- | -- | -- | -- | -- |
| 104.11 | 0.477 | 2.88 | -- | 0.122 | -- | -- | -- | 0.0686 | 15 | -- | -- | -- | -- |
| 104.56 | 0.476 | 2.88 | -- | -- | 0.27 | -- | -- | 0.0715 | -- | 997.3 | 1084 | -- | -- |
| 104.96 | 0.478 | 2.88 | -- | -- | -- | -- | -- | 0.066 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.46 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 2 | 90.21 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 11 | 90.23 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 21 | 90.24 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 97 | 90.77 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 108 | 91.15 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 8 |
| 117 | 91.20 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 12 |
| 118 | 91.23 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 10 | 10 |
| 164 | 91.68 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 6 |
| 171 | 91.80 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 245 | 94.02 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 20 | 18 |
| 268 | 95.39 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 20 | 8 |
| 270 | 95.54 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 274 | 95.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 276 | 96.13 | wind | 7.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 277 | 96.14 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 281 | 96.28 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 10 | 2 |
| 294 | 96.36 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 295 | 96.40 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 299 | 96.45 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 312 | 97.20 | atmosphere | 995.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 313 | 97.27 | atmosphere | 995.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 341 | 97.78 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 8 |
| 347 | 97.89 | atmosphere | 995.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 368 | 98.11 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 2 | 11 |
| 407 | 98.54 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 8 | 5 |
| 453 | 99.16 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 476 | 99.34 | wind | 7.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 497 | 99.51 | atmosphere | 1000.0 | 30 | < th | dose independent | sin | 3 | NA |
| 515 | 99.61 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 516 | 99.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 562 | 99.76 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 577 | 99.80 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 2 | NA |
| 593 | 99.87 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 670 | 100.09 | radiation | 20.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 763 | 100.13 | atmosphere | 995.0 | 4320 | < th | dose dependent | no | NA | NA |
| 842 | 100.17 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 903 | 100.27 | humidity | 70.0 | 30 | > th | dose independent | rect. | 10 | 2 |
| 919 | 100.29 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 23 | NA |
| 943 | 100.32 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 950 | 100.32 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 970 | 100.39 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 974 | 100.39 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 975 | 100.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |