Os06g0567900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO).
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Os06g0567900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 465.31 | 1.01 | 6.91 | -1.62 | 2.64 | -2.4 | 2.84 | -0.11 | -0.237 | 6.68 | 75 | 862 | -- | -- |
| 465.32 | 1 | 6.91 | -1.63 | 2.63 | -2.39 | 2.81 | -- | -0.242 | 6.68 | 75 | 866 | -- | -- |
| 481.58 | 1.02 | 6.91 | -1.66 | 2.66 | -2.35 | -- | 1.07 | -0.235 | 6.51 | 75 | 844 | -- | -- |
| 484.37 | 1.03 | 6.91 | -1.57 | 2.53 | -2.24 | -- | -- | -0.243 | 6.54 | 74.37 | 885 | -- | -- |
| 618.52 | 1.16 | 7.01 | -1.65 | -- | -2.21 | -- | 0.701 | -0.327 | -- | 74.55 | 1292 | -- | -- |
| 577.37 | 1.13 | 6.91 | -1.33 | 1.83 | -- | 1.45 | -- | -0.0854 | 5.18 | -- | -- | -- | -- |
| 582.09 | 1.13 | 6.91 | -1.33 | 1.84 | -- | -- | -- | -0.093 | 4.98 | -- | -- | -- | -- |
| 615.95 | 1.16 | 7 | -1.59 | -- | -2.12 | -- | -- | -0.328 | -- | 74.36 | 1289 | -- | -- |
| 548.34 | 1.09 | 6.89 | -- | 2.35 | -2.02 | -- | -- | -0.0769 | 6.5 | 74.33 | 910 | -- | -- |
| 759.37 | 1.29 | 6.93 | -1.26 | -- | -- | -- | -- | -0.0459 | -- | -- | -- | -- | -- |
| 628.55 | 1.17 | 6.88 | -- | 1.81 | -- | -- | -- | 0.0549 | 5 | -- | -- | -- | -- |
| 682.05 | 1.22 | 6.98 | -- | -- | -1.93 | -- | -- | -0.162 | -- | 74 | 1292 | -- | -- |
| 801.3 | 1.32 | 6.9 | -- | -- | -- | -- | -- | 0.094 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 463.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 2 | 463.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 3 | 463.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 4 | 464.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 6 | 464.88 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 20 |
| 11 | 465.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 9 |
| 12 | 465.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 13 | 465.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 9 |
| 15 | 465.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 12 |
| 16 | 465.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 9 |
| 17 | 465.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 31 | 465.93 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 12 |
| 32 | 465.93 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 12 |
| 37 | 466.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 12 |
| 107 | 468.42 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 109 | 468.45 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 115 | 468.81 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 18 | NA |
| 136 | 469.14 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 149 | 469.59 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 152 | 469.72 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 165 | 469.95 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 10 |
| 173 | 470.13 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 10 | 12 |
| 181 | 470.31 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 12 |
| 184 | 470.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 7 |
| 197 | 470.52 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 14 | 7 |
| 200 | 470.54 | humidity | 80.0 | 720 | < th | dose independent | rect. | 9 | 12 |
| 205 | 470.59 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 208 | 470.63 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 210 | 470.67 | humidity | 80.0 | 720 | > th | dose independent | rect. | 10 | 12 |
| 211 | 470.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 230 | 470.95 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 244 | 471.19 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 276 | 471.51 | humidity | 80.0 | 720 | < th | dose independent | rect. | 7 | 14 |
| 292 | 471.67 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 312 | 471.92 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 19 | NA |
| 313 | 471.92 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 19 | NA |
| 315 | 471.94 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 19 | NA |
| 319 | 471.98 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 322 | 472.02 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 324 | 472.03 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 366 | 472.46 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 14 | 7 |
| 386 | 472.61 | humidity | 80.0 | 720 | > th | dose independent | rect. | 5 | 17 |
| 394 | 472.77 | humidity | 80.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 411 | 472.99 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 412 | 472.99 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 420 | 473.07 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 439 | 473.17 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 470 | 473.34 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 489 | 473.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 7 |
| 490 | 473.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 7 |
| 493 | 473.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 514 | 473.85 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 520 | 473.90 | humidity | 80.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 525 | 473.93 | humidity | 60.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 534 | 473.98 | humidity | 70.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 536 | 473.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 560 | 474.18 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 586 | 474.37 | temperature | 25.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 587 | 474.37 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 612 | 474.53 | humidity | 60.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 659 | 474.83 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 672 | 474.90 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 18 |
| 680 | 474.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 688 | 474.97 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 708 | 475.05 | humidity | 80.0 | 720 | < th | dose independent | sin | 20 | NA |
| 740 | 475.31 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 757 | 475.43 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 763 | 475.45 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 787 | 475.61 | humidity | 80.0 | 720 | > th | dose independent | rect. | 14 | 8 |
| 798 | 475.72 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 812 | 475.72 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 815 | 475.73 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 872 | 476.20 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 877 | 476.23 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 5 |