Os06g0564800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0564800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.3 | 0.232 | 8.87 | -0.121 | 0.5 | -0.639 | 0.105 | 0.499 | 0.163 | 5.43 | 18.3 | 4324 | -- | -- |
| 23.62 | 0.226 | 8.86 | -0.0745 | 0.515 | -0.765 | 0.147 | -- | 0.246 | 5.31 | 15.45 | 11164 | -- | -- |
| 24.29 | 0.23 | 8.86 | -0.108 | 0.475 | -0.632 | -- | 0.53 | 0.165 | 5.47 | 18.6 | 4672 | -- | -- |
| 23.59 | 0.226 | 8.86 | -0.0694 | 0.491 | -0.798 | -- | -- | 0.247 | 5.37 | 13.42 | 10924 | -- | -- |
| 33.81 | 0.272 | 8.89 | -0.3 | -- | -0.761 | -- | 0.562 | 0.145 | -- | 18.6 | 4672 | -- | -- |
| 33.95 | 0.273 | 8.92 | -0.558 | 0.476 | -- | 0.133 | -- | -0.00978 | 5.63 | -- | -- | -- | -- |
| 34 | 0.273 | 8.92 | -0.557 | 0.477 | -- | -- | -- | -0.0104 | 5.61 | -- | -- | -- | -- |
| 34.15 | 0.273 | 8.9 | -0.394 | -- | -0.737 | -- | -- | 0.118 | -- | 18.6 | 4672 | -- | -- |
| 23.63 | 0.226 | 8.85 | -- | 0.499 | -0.835 | -- | -- | 0.265 | 5.4 | 8.399 | 11226 | -- | -- |
| 45.81 | 0.316 | 8.92 | -0.542 | -- | -- | -- | -- | 0.00111 | -- | -- | -- | -- | -- |
| 42.18 | 0.304 | 8.9 | -- | 0.468 | -- | -- | -- | 0.0517 | 5.66 | -- | -- | -- | -- |
| 35.76 | 0.278 | 8.85 | -- | -- | -0.792 | -- | -- | 0.306 | -- | 10.08 | 13516 | -- | -- |
| 53.55 | 0.342 | 8.91 | -- | -- | -- | -- | -- | 0.0612 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.08 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 3 | 22.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 5 | 22.38 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 50 | 23.07 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 87 | 23.28 | temperature | 15 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 101 | 23.33 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 137 | 23.44 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 3 |
| 144 | 23.46 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 254 | 23.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 15 |
| 269 | 23.68 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 271 | 23.68 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 286 | 23.70 | temperature | 10 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 287 | 23.70 | temperature | 30 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 325 | 23.73 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 432 | 23.78 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 459 | 23.79 | temperature | 10 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 496 | 23.81 | temperature | 10 | 14400 | > th | dose dependent | sin | 16 | NA |
| 608 | 23.85 | temperature | 20 | 4320 | > th | dose dependent | sin | 1 | NA |
| 740 | 23.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 10 |
| 761 | 23.89 | temperature | 30 | 14400 | < th | dose dependent | sin | 15 | NA |
| 848 | 23.90 | temperature | 10 | 14400 | > th | dose dependent | rect. | 3 | 20 |
| 896 | 23.91 | temperature | 10 | 14400 | > th | dose dependent | rect. | 4 | 18 |
| 920 | 23.92 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |