Os06g0564000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0564000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.03 | 0.415 | 2.59 | 0.635 | 0.0602 | -40.9 | 0.236 | 106 | 0.0724 | 4.92 | 46 | 175 | -- | -- |
| 84.83 | 0.429 | 2.84 | 0.0649 | 0.061 | 0.687 | 0.0873 | -- | 0.0815 | 5.56 | 51.03 | 118 | -- | -- |
| 77.31 | 0.41 | 2.54 | 0.825 | 0.0528 | -40.1 | -- | 104 | 0.082 | 5.85 | 43.78 | 172 | -- | -- |
| 80.38 | 0.418 | 2.86 | 0.0342 | 0.0537 | 1.95 | -- | -- | 0.0578 | 5.25 | 46.02 | 175 | -- | -- |
| 77.44 | 0.41 | 2.52 | 0.83 | -- | -40.8 | -- | 106 | 0.071 | -- | 43.63 | 172 | -- | -- |
| 86.87 | 0.437 | 2.84 | 0.094 | 0.0295 | -- | -0.137 | -- | 0.0667 | 7.47 | -- | -- | -- | -- |
| 86.92 | 0.437 | 2.84 | 0.091 | 0.0294 | -- | -- | -- | 0.0671 | 8.06 | -- | -- | -- | -- |
| 80.33 | 0.417 | 2.85 | 0.00374 | -- | 2.09 | -- | -- | 0.0683 | -- | 46 | 175 | -- | -- |
| 80.25 | 0.417 | 2.85 | -- | 0.0573 | 2.13 | -- | -- | 0.0605 | 5.19 | 46.75 | 175 | -- | -- |
| 86.96 | 0.436 | 2.84 | 0.0913 | -- | -- | -- | -- | 0.0674 | -- | -- | -- | -- | -- |
| 87.13 | 0.437 | 2.84 | -- | 0.03 | -- | -- | -- | 0.0569 | 7.84 | -- | -- | -- | -- |
| 80.32 | 0.417 | 2.84 | -- | -- | 2.12 | -- | -- | 0.0731 | -- | 46 | 175 | -- | -- |
| 87.18 | 0.436 | 2.84 | -- | -- | -- | -- | -- | 0.0573 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.11 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 2 | 70.11 | wind | 5.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 4 | 74.10 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 6 | 74.10 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 13 | 75.73 | humidity | 50.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 14 | 75.73 | humidity | 50.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 15 | 75.73 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 224 | 76.10 | humidity | 50.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 225 | 76.20 | wind | 5.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 226 | 76.21 | wind | 5.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 236 | 76.42 | humidity | 50.0 | 90 | < th | dose independent | sin | 12 | NA |
| 237 | 76.48 | wind | 5.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 243 | 76.72 | humidity | 50.0 | 90 | > th | dose independent | sin | 12 | NA |
| 256 | 77.22 | radiation | 20.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 271 | 77.75 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 283 | 77.78 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 293 | 78.00 | humidity | 60.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 300 | 78.03 | wind | 7.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 302 | 78.13 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 305 | 78.19 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 308 | 78.22 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 348 | 78.43 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 350 | 78.46 | temperature | 30.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 365 | 78.61 | wind | 7.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 366 | 78.61 | temperature | 20.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 368 | 78.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 371 | 78.62 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 373 | 78.62 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 374 | 78.62 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 1 |
| 375 | 78.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 376 | 78.62 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 380 | 78.71 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 383 | 78.75 | temperature | 30.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 385 | 78.76 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 393 | 78.92 | humidity | 70.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 398 | 78.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 403 | 78.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 417 | 78.98 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 1 |
| 423 | 78.98 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 442 | 79.01 | wind | 1.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 472 | 79.06 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 501 | 79.17 | wind | 5.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 505 | 79.18 | wind | 1.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 626 | 79.80 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 832 | 80.51 | temperature | 30.0 | 30 | > th | dose independent | sin | 14 | NA |
| 911 | 80.76 | temperature | 30.0 | 30 | < th | dose independent | sin | 14 | NA |
| 913 | 80.77 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 927 | 80.84 | humidity | 50.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 929 | 80.85 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 23 |
| 987 | 80.97 | wind | 7.0 | 10 | < th | dose independent | rect. | 2 | 15 |