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Os06g0561100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0252) R2 : 0.205
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.66 (0.0619) R2dC : 0.2 R2C : 0.196
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.105 (0.0528) R2dN8 : 0.00896 R2N8 : 0.00539
σ : 0.474
deviance : 102.53
__
_____
C
peak time of C : 9.44
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.6 0.386 12.2 0.673 0.433 -0.712 2.07 -0.483 -0.0277 4.53 19.99 10 -- --
67.61 0.383 12.2 0.656 0.403 -0.679 1.95 -- -0.0317 5.11 20 5 -- --
76.93 0.409 12.2 0.681 0.53 -0.858 -- 0.0353 -0.0305 3.15 19.02 7 -- --
76.28 0.407 12.2 0.67 0.542 -0.876 -- -- -0.0306 2.99 18.15 5 -- --
85.86 0.432 12.2 0.698 -- -0.586 -- 0.0568 -0.0212 -- 17.6 5 -- --
87.23 0.438 12.2 0.657 0.665 -- 0.988 -- -0.0315 8.87 -- -- -- --
89.81 0.444 12.2 0.695 0.661 -- -- -- -0.028 9.52 -- -- -- --
85.88 0.432 12.2 0.696 -- -0.586 -- -- -0.0214 -- 17.6 5 -- --
88.25 0.438 12.2 -- 0.568 -0.899 -- -- -0.106 2.88 18.51 5 -- --
115.54 0.502 12.2 0.69 -- -- -- -- -0.0263 -- -- -- -- --
102.53 0.474 12.2 -- 0.66 -- -- -- -0.105 9.44 -- -- -- --
98.62 0.463 12.2 -- -- -0.588 -- -- -0.0972 -- 18.56 5 -- --
128.1 0.528 12.2 -- -- -- -- -- -0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.67 humidity 50.0 270 > th dose independent rect. 4 20
2 58.98 humidity 50.0 270 > th dose independent rect. 2 23
3 59.37 humidity 50.0 270 > th dose independent rect. 5 18
9 60.74 temperature 30.0 270 < th dose dependent rect. 24 4
10 60.82 temperature 30.0 270 < th dose independent rect. 4 20
15 61.08 radiation 10.0 10 < th dose dependent rect. 1 18
17 61.35 radiation 10.0 10 < th dose dependent sin 3 NA
18 61.44 radiation 40.0 10 < th dose dependent rect. 1 10
19 61.46 radiation 40.0 270 < th dose dependent rect. 23 10
22 61.74 temperature 30.0 270 < th dose independent rect. 5 18
31 61.88 radiation 10.0 10 < th dose dependent rect. 1 16
32 61.89 temperature 15.0 270 > th dose independent rect. 23 7
38 62.11 temperature 15.0 270 > th dose independent rect. 23 9
41 62.16 atmosphere 1010.0 270 < th dose independent rect. 23 6
46 62.28 radiation 1.0 270 < th dose independent rect. 23 7
51 62.38 radiation 10.0 10 < th dose dependent rect. 1 13
52 62.42 radiation 10.0 10 < th dose dependent rect. 1 11
74 62.79 humidity 70.0 270 > th dose independent rect. 23 9
85 62.90 radiation 20.0 270 < th dose independent rect. 23 9
91 63.04 temperature 30.0 90 < th dose dependent rect. 1 8
94 63.05 temperature 30.0 270 < th dose independent rect. 23 7
95 63.05 humidity 50.0 270 > th dose independent rect. 23 7
98 63.05 atmosphere 995.0 270 > th dose independent rect. 23 7
99 63.05 radiation 20.0 270 < th dose independent rect. 23 7
102 63.05 temperature 10.0 270 > th dose independent rect. 6 17
103 63.05 precipitation 0.1 270 < th dose independent rect. 6 17
106 63.05 precipitation 0.1 270 < th dose dependent rect. 6 17
107 63.06 wind 9.0 270 < th dose independent rect. 23 7
110 63.11 radiation 1.0 90 < th dose independent rect. 1 14
118 63.19 temperature 15.0 270 > th dose independent rect. 24 4
119 63.19 atmosphere 1000.0 270 > th dose independent rect. 24 4
120 63.19 atmosphere 1010.0 270 < th dose independent rect. 24 4
122 63.21 temperature 30.0 270 < th dose independent rect. 24 4
123 63.21 humidity 50.0 270 > th dose independent rect. 24 4
128 63.21 radiation 1.0 270 < th dose independent rect. 24 4
133 63.21 temperature 10.0 270 > th dose independent rect. 4 20
134 63.21 radiation 1.0 270 < th dose dependent rect. 24 4
139 63.22 wind 9.0 270 < th dose independent rect. 24 4
141 63.22 precipitation 0.1 270 < th dose independent rect. 4 20
142 63.22 precipitation 0.1 270 < th dose dependent rect. 4 20
151 63.31 temperature 30.0 270 < th dose independent rect. 23 9
152 63.31 humidity 50.0 270 > th dose independent rect. 23 9
154 63.31 atmosphere 995.0 270 > th dose independent rect. 23 9
155 63.31 temperature 10.0 270 > th dose independent rect. 8 15
157 63.32 wind 9.0 270 < th dose independent rect. 23 9
178 63.38 temperature 15.0 270 > th dose independent rect. 17 22
184 63.41 temperature 30.0 10 < th dose dependent rect. 1 8
186 63.42 precipitation 0.1 270 < th dose independent rect. 23 7
189 63.42 precipitation 0.1 270 < th dose dependent rect. 23 7
190 63.44 precipitation 0.1 270 < th dose independent rect. 24 4
191 63.44 precipitation 0.1 270 < th dose dependent rect. 24 4
196 63.47 precipitation 0.1 270 < th dose independent rect. 8 15
198 63.47 precipitation 0.1 270 < th dose dependent rect. 8 15
210 63.51 atmosphere 1015.0 270 < th dose independent rect. 23 9
225 63.62 precipitation 0.1 270 < th dose independent rect. 19 18
228 63.62 precipitation 0.1 270 < th dose dependent rect. 19 18
230 63.64 wind 1.0 270 > th dose independent rect. 24 5
232 63.64 temperature 30.0 10 < th dose dependent rect. 1 5
254 63.77 precipitation 0.1 270 < th dose independent rect. 23 9
260 63.77 precipitation 0.1 270 < th dose dependent rect. 23 9
266 63.81 humidity 50.0 10 > th dose dependent rect. 1 10
301 63.93 radiation 1.0 90 < th dose independent rect. 1 9
311 63.96 radiation 1.0 270 < th dose independent rect. 23 15
312 63.96 temperature 15.0 90 > th dose independent rect. 13 16
324 64.05 wind 1.0 270 > th dose independent rect. 12 7
325 64.05 radiation 10.0 10 < th dose dependent rect. 1 7
330 64.08 temperature 20.0 270 > th dose independent rect. 13 6
331 64.08 humidity 50.0 270 > th dose dependent rect. 23 6
333 64.10 humidity 50.0 270 > th dose dependent rect. 24 4
359 64.21 temperature 10.0 270 > th dose dependent rect. 12 16
364 64.23 radiation 1.0 270 < th dose dependent rect. 23 15
378 64.33 wind 9.0 270 < th dose independent rect. 13 6
385 64.36 atmosphere 1000.0 90 > th dose independent rect. 13 16
387 64.37 radiation 1.0 90 > th dose independent rect. 5 10
407 64.41 temperature 10.0 270 > th dose dependent rect. 13 6
414 64.43 atmosphere 995.0 270 > th dose independent rect. 4 20
432 64.49 wind 1.0 270 > th dose independent rect. 6 17
438 64.51 precipitation 0.1 270 < th dose independent rect. 13 6
440 64.51 precipitation 0.1 270 < th dose dependent rect. 13 6
442 64.52 wind 1.0 270 > th dose independent rect. 4 20
466 64.64 atmosphere 1010.0 10 < th dose independent rect. 14 16
469 64.65 temperature 15.0 10 > th dose independent rect. 14 16
471 64.66 temperature 10.0 270 > th dose independent rect. 13 6
473 64.66 atmosphere 1010.0 270 < th dose independent rect. 13 6
475 64.66 temperature 10.0 270 > th dose independent rect. 19 18
476 64.66 atmosphere 995.0 270 > th dose independent rect. 19 18
477 64.67 atmosphere 1010.0 270 < th dose independent rect. 12 16
478 64.67 wind 9.0 270 < th dose independent rect. 6 17
497 64.74 atmosphere 995.0 270 > th dose independent rect. 5 18
500 64.76 wind 7.0 270 < th dose independent rect. 23 19
503 64.77 radiation 1.0 90 < th dose independent sin 3 NA
525 64.82 wind 1.0 30 > th dose independent rect. 6 19
527 64.83 wind 1.0 270 > th dose independent rect. 8 15
537 64.86 atmosphere 1015.0 270 < th dose dependent rect. 23 6
540 64.87 atmosphere 1000.0 10 > th dose independent rect. 1 5
550 64.87 humidity 50.0 270 > th dose independent rect. 19 17
553 64.87 atmosphere 1015.0 270 < th dose dependent rect. 24 4
598 64.97 wind 9.0 270 < th dose independent rect. 19 18
614 65.02 radiation 1.0 10 > th dose independent rect. 6 10
652 65.10 wind 9.0 270 < th dose independent rect. 4 20
670 65.12 atmosphere 995.0 270 > th dose independent rect. 13 6
685 65.18 atmosphere 995.0 270 > th dose dependent rect. 13 6
688 65.20 atmosphere 1000.0 270 > th dose independent rect. 1 1
692 65.21 wind 9.0 270 < th dose independent rect. 14 15
694 65.22 precipitation 0.1 10 < th dose independent rect. 6 19
696 65.22 precipitation 0.1 10 < th dose dependent rect. 6 19
718 65.28 atmosphere 1015.0 270 < th dose independent rect. 6 17
724 65.30 wind 9.0 10 < th dose independent rect. 1 5
725 65.30 temperature 10.0 10 > th dose independent rect. 1 5
727 65.30 temperature 30.0 10 < th dose independent rect. 1 5
728 65.30 humidity 50.0 10 > th dose independent rect. 1 5
732 65.30 atmosphere 1010.0 10 < th dose independent rect. 1 5
734 65.30 radiation 20.0 10 < th dose independent rect. 1 5
737 65.30 temperature 10.0 10 > th dose independent rect. 6 19
789 65.40 humidity 60.0 270 > th dose independent rect. 17 7
791 65.40 atmosphere 1000.0 10 > th dose independent rect. 14 16
793 65.41 wind 9.0 4320 < th dose independent rect. 2 5
809 65.44 temperature 10.0 1440 > th dose independent rect. 2 5
812 65.44 temperature 30.0 1440 < th dose independent rect. 2 5
816 65.44 humidity 50.0 1440 > th dose independent rect. 2 5
821 65.44 atmosphere 995.0 1440 > th dose independent rect. 2 5
822 65.44 radiation 40.0 1440 < th dose independent rect. 2 5
826 65.44 temperature 10.0 1440 > th dose independent rect. 7 19
833 65.46 temperature 10.0 270 > th dose independent rect. 5 9
834 65.46 atmosphere 995.0 270 > th dose independent rect. 5 9
835 65.46 atmosphere 1015.0 270 < th dose independent rect. 5 9
836 65.46 precipitation 0.1 270 < th dose independent rect. 5 9
838 65.46 humidity 50.0 10 > th dose dependent rect. 1 5
840 65.46 precipitation 0.1 270 < th dose dependent rect. 5 9
841 65.47 humidity 60.0 14400 > th dose independent rect. 20 7
875 65.57 temperature 15.0 10 > th dose independent rect. 16 14
879 65.58 temperature 30.0 270 < th dose independent rect. 17 7
913 65.63 temperature 10.0 270 > th dose independent rect. 1 1
916 65.63 humidity 50.0 270 > th dose independent rect. 1 1
920 65.63 atmosphere 1010.0 270 < th dose independent rect. 1 1
922 65.63 radiation 1.0 270 < th dose independent rect. 1 1
939 65.63 temperature 10.0 270 > th dose independent rect. 2 23
940 65.63 radiation 1.0 270 < th dose dependent rect. 1 1
951 65.65 wind 9.0 270 < th dose independent rect. 1 1
959 65.66 precipitation 0.1 270 < th dose independent rect. 1 1
961 65.66 precipitation 0.1 270 < th dose dependent rect. 1 1