Os06g0557600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0557600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.29 | 0.491 | 9.07 | 1.54 | 0.335 | -1.16 | -0.425 | -3.56 | 0.448 | 2.03 | 22 | 1332 | -- | -- |
| 128.26 | 0.527 | 9.2 | 0.38 | 0.132 | -1.31 | 0.201 | -- | 0.0634 | 0.695 | 24.8 | 1190 | -- | -- |
| 109.7 | 0.488 | 9.06 | 1.52 | 0.341 | -1.2 | -- | -3.61 | 0.448 | 1.68 | 21.96 | 1352 | -- | -- |
| 127.77 | 0.526 | 9.2 | 0.404 | 0.122 | -1.31 | -- | -- | 0.069 | 2.13 | 24.75 | 1186 | -- | -- |
| 116.11 | 0.502 | 9.07 | 1.48 | -- | -1.23 | -- | -3.47 | 0.431 | -- | 21.93 | 1246 | -- | -- |
| 181.57 | 0.632 | 9.1 | 0.829 | 0.41 | -- | -0.128 | -- | 0.538 | 1.92 | -- | -- | -- | -- |
| 181.63 | 0.631 | 9.1 | 0.833 | 0.409 | -- | -- | -- | 0.539 | 1.85 | -- | -- | -- | -- |
| 128.46 | 0.528 | 9.21 | 0.399 | -- | -1.35 | -- | -- | 0.0533 | -- | 24.79 | 1150 | -- | -- |
| 131.77 | 0.535 | 9.22 | -- | 0.124 | -1.39 | -- | -- | -0.00612 | 2.78 | 24.8 | 1186 | -- | -- |
| 191.75 | 0.647 | 9.1 | 0.85 | -- | -- | -- | -- | 0.549 | -- | -- | -- | -- | -- |
| 199.91 | 0.661 | 9.12 | -- | 0.424 | -- | -- | -- | 0.447 | 1.91 | -- | -- | -- | -- |
| 132.37 | 0.536 | 9.23 | -- | -- | -1.41 | -- | -- | -0.0215 | -- | 24.8 | 1161 | -- | -- |
| 210.79 | 0.678 | 9.12 | -- | -- | -- | -- | -- | 0.454 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 9 | 112.30 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 10 | 112.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 11 | 112.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 12 | 112.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 15 | 112.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 21 | 112.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 22 | 112.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 29 | 112.81 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 59 | 113.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 65 | 113.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 87 | 113.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 22 |
| 88 | 113.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 90 | 113.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 105 | 113.86 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 137 | 114.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 138 | 114.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 139 | 114.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 143 | 114.13 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 22 |
| 159 | 114.28 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 160 | 114.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 167 | 114.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 170 | 114.39 | temperature | 25 | 1440 | < th | dose dependent | sin | 6 | NA |
| 196 | 114.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 244 | 114.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 269 | 114.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 12 |
| 337 | 115.24 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 15 |
| 388 | 115.42 | temperature | 20 | 1440 | > th | dose dependent | sin | 9 | NA |
| 814 | 116.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |