Os06g0548200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD linked oxidase, N-terminal domain containing protein.
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Os06g0548200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAD linked oxidase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.02 | 0.594 | 10.6 | 0.893 | 1.41 | 1.11 | 0.771 | 3.52 | 0.405 | 15.9 | 3.643 | 5841 | -- | -- |
| 165.62 | 0.599 | 10.4 | 0.85 | 1.43 | 1.08 | 0.779 | -- | 0.592 | 15.9 | 2.207 | 9798 | -- | -- |
| 156.71 | 0.583 | 10.5 | 0.823 | 1.37 | 1.34 | -- | 2.84 | 0.562 | 16 | 2.777 | 10253 | -- | -- |
| 167.05 | 0.602 | 10.4 | 0.88 | 1.42 | 1.1 | -- | -- | 0.598 | 15.9 | 2.301 | 9733 | -- | -- |
| 246.13 | 0.735 | 10.4 | 0.701 | -- | 1.43 | -- | 2.39 | 0.627 | -- | 2.682 | 10433 | -- | -- |
| 175.91 | 0.622 | 10.4 | 0.46 | 1.4 | -- | 0.745 | -- | 0.651 | 15.9 | -- | -- | -- | -- |
| 177.47 | 0.624 | 10.4 | 0.469 | 1.41 | -- | -- | -- | 0.655 | 16 | -- | -- | -- | -- |
| 245.77 | 0.733 | 10.4 | 0.73 | -- | 1.31 | -- | -- | 0.659 | -- | 1.889 | 10416 | -- | -- |
| 181.38 | 0.627 | 10.4 | -- | 1.41 | 0.385 | -- | -- | 0.574 | 16 | 2.1 | 9782 | -- | -- |
| 285.82 | 0.79 | 10.4 | 0.412 | -- | -- | -- | -- | 0.617 | -- | -- | -- | -- | -- |
| 183.28 | 0.633 | 10.4 | -- | 1.4 | -- | -- | -- | 0.602 | 16 | -- | -- | -- | -- |
| 258.94 | 0.752 | 10.4 | -- | -- | 1.13 | -- | -- | 0.577 | -- | 1.889 | 10416 | -- | -- |
| 290.3 | 0.795 | 10.4 | -- | -- | -- | -- | -- | 0.571 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.78 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 15 | 149.74 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 29 | 150.47 | temperature | 30 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 30 | 150.48 | temperature | 30 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 34 | 150.62 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 35 | 150.62 | temperature | 30 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 36 | 150.66 | temperature | 30 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 38 | 150.69 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 86 | 155.05 | humidity | 70 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 87 | 155.17 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 88 | 155.25 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 108 | 155.45 | humidity | 70 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 115 | 155.50 | humidity | 70 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 122 | 155.52 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 15 |
| 129 | 155.55 | humidity | 70 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 133 | 155.57 | humidity | 70 | 43200 | < th | dose independent | sin | 6 | NA |
| 159 | 155.66 | radiation | 10 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 182 | 155.79 | humidity | 70 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 192 | 155.85 | humidity | 70 | 43200 | > th | dose independent | sin | 6 | NA |
| 292 | 156.26 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 10 |
| 293 | 156.27 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 301 | 156.34 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 306 | 156.37 | wind | 5 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 311 | 156.39 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 1 |
| 386 | 156.55 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 406 | 156.69 | radiation | 20 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 430 | 156.77 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 431 | 156.77 | radiation | 10 | 43200 | > th | dose independent | rect. | 12 | 21 |
| 440 | 156.81 | wind | 7 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 444 | 156.83 | radiation | 10 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 453 | 156.86 | temperature | 30 | 43200 | > th | dose independent | sin | 9 | NA |
| 455 | 156.86 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 468 | 156.92 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 474 | 156.95 | temperature | 30 | 43200 | < th | dose independent | sin | 8 | NA |
| 485 | 156.97 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 506 | 157.00 | radiation | 10 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 507 | 157.00 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 518 | 157.04 | radiation | 10 | 43200 | > th | dose independent | sin | 12 | NA |
| 521 | 157.04 | temperature | 30 | 43200 | > th | dose dependent | sin | 9 | NA |
| 523 | 157.05 | radiation | 10 | 43200 | > th | dose independent | sin | 22 | NA |
| 534 | 157.07 | wind | 5 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 540 | 157.09 | radiation | 10 | 43200 | > th | dose independent | no | NA | NA |
| 541 | 157.09 | radiation | 20 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 543 | 157.09 | radiation | 10 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 678 | 157.14 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 764 | 157.20 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 772 | 157.22 | radiation | 10 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 784 | 157.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 801 | 157.24 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 803 | 157.24 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 863 | 157.30 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 865 | 157.30 | radiation | 10 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 898 | 157.36 | humidity | 70 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 901 | 157.36 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 955 | 157.45 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 958 | 157.45 | humidity | 70 | 43200 | > th | dose independent | rect. | 15 | 22 |
| 995 | 157.49 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 1 |