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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0531400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF231, plant domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.39 (0.032) R2 : 0.00769
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.127 (0.0674) R2dN8 : 0.00993 R2N8 : 0.00769
σ : 0.603
deviance : 166.86
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
162.81 0.6 3.27 1.1 0.0615 0.579 -0.391 -4.4 0.2 4.1 30 1348 -- --
164.48 0.597 3.36 0.342 0.0654 0.305 -0.404 -- 0.244 3.6 21.07 5192 -- --
163.23 0.595 3.27 1.1 0.0585 0.577 -- -4.32 0.198 4.59 29.98 1348 -- --
164.76 0.598 3.36 0.363 0.0666 0.312 -- -- 0.239 5.41 20.9 5127 -- --
163.43 0.595 3.27 1.1 -- 0.573 -- -4.36 0.203 -- 29.96 1348 -- --
165.72 0.604 3.38 0.144 0.0668 -- -0.358 -- 0.14 4.67 -- -- -- --
165.99 0.603 3.38 0.146 0.0744 -- -- -- 0.142 6.43 -- -- -- --
164.98 0.598 3.36 0.319 -- 0.269 -- -- 0.234 -- 20.9 5112 -- --
166.19 0.6 3.38 -- 0.112 0.136 -- -- 0.147 5.27 23.8 2753 -- --
166.28 0.603 3.38 0.148 -- -- -- -- 0.143 -- -- -- -- --
166.56 0.604 3.38 -- 0.0764 -- -- -- 0.125 6.32 -- -- -- --
166.26 0.601 3.38 -- -- 0.117 -- -- 0.169 -- 22.82 2309 -- --
166.86 0.603 3.39 -- -- -- -- -- 0.127 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 152.06 temperature 10.0 720 > th dose independent rect. 15 8
2 152.06 temperature 10.0 720 > th dose independent rect. 23 16
3 152.14 temperature 10.0 720 > th dose independent rect. 3 8
4 152.14 atmosphere 995.0 720 > th dose independent rect. 3 8
5 152.14 temperature 10.0 720 > th dose independent rect. 11 16
6 152.65 wind 9.0 720 < th dose independent rect. 3 8
7 152.68 precipitation 0.1 720 < th dose independent rect. 15 8
8 152.68 precipitation 0.1 720 < th dose dependent rect. 15 8
9 152.77 humidity 50.0 720 > th dose independent rect. 3 8
10 153.00 atmosphere 995.0 720 > th dose independent rect. 23 16
11 153.12 atmosphere 1015.0 720 < th dose independent rect. 3 8
14 153.89 precipitation 0.1 720 < th dose independent rect. 11 16
15 153.89 precipitation 0.1 720 < th dose dependent rect. 11 16
18 154.56 radiation 40.0 720 < th dose independent rect. 15 8
19 154.61 atmosphere 995.0 720 > th dose independent rect. 11 16
20 154.77 atmosphere 995.0 720 > th dose independent rect. 15 8
21 155.07 wind 9.0 720 < th dose independent rect. 15 8
22 155.11 precipitation 0.1 720 < th dose independent rect. 3 8
23 155.11 precipitation 0.1 720 < th dose dependent rect. 3 8
25 155.85 precipitation 0.1 720 < th dose independent rect. 23 16
26 155.85 precipitation 0.1 720 < th dose dependent rect. 23 16
27 156.50 humidity 50.0 720 > th dose independent rect. 23 16
28 156.76 wind 9.0 720 < th dose independent rect. 23 16
29 157.06 atmosphere 1000.0 30 > th dose independent rect. 23 23
31 157.20 radiation 10.0 43200 < th dose dependent rect. 23 1
32 157.28 temperature 25.0 30 > th dose dependent rect. 22 1
33 157.31 temperature 15.0 30 > th dose independent rect. 23 23
34 157.32 wind 9.0 1440 < th dose independent rect. 23 1
35 157.32 temperature 10.0 1440 > th dose independent rect. 23 1
38 157.32 temperature 30.0 1440 < th dose independent rect. 23 1
42 157.32 humidity 50.0 1440 > th dose independent rect. 23 1
52 157.32 atmosphere 995.0 1440 > th dose independent rect. 23 1
53 157.32 radiation 1.0 1440 < th dose independent rect. 23 1
73 157.32 temperature 10.0 1440 > th dose independent rect. 24 23
76 157.32 radiation 1.0 1440 < th dose dependent rect. 23 1
81 157.36 humidity 90.0 30 < th dose independent rect. 22 1
82 157.36 atmosphere 1005.0 30 > th dose dependent rect. 22 1
83 157.37 temperature 25.0 30 > th dose independent rect. 22 1
84 157.38 humidity 90.0 30 < th dose dependent rect. 22 1
85 157.39 wind 1.0 720 > th dose independent rect. 15 8
87 157.41 atmosphere 1005.0 30 > th dose independent rect. 22 1
88 157.42 wind 1.0 30 > th dose independent rect. 22 1
96 157.46 wind 3.0 30 < th dose independent rect. 22 1
101 157.48 temperature 10.0 30 > th dose independent rect. 22 1
103 157.48 temperature 30.0 30 < th dose independent rect. 22 1
104 157.48 humidity 50.0 30 > th dose independent rect. 22 1
108 157.48 atmosphere 995.0 30 > th dose independent rect. 22 1
110 157.48 atmosphere 1010.0 30 < th dose independent rect. 22 1
112 157.48 radiation 1.0 30 < th dose independent rect. 22 1
117 157.48 precipitation 0.1 30 < th dose independent rect. 22 1
119 157.48 wind 7.0 30 < th dose dependent rect. 22 1
121 157.48 radiation 1.0 30 < th dose dependent rect. 22 1
126 157.48 precipitation 0.1 30 < th dose dependent rect. 22 1
128 157.50 humidity 50.0 30 > th dose dependent rect. 22 1
131 157.51 wind 1.0 30 > th dose dependent rect. 22 1
139 157.59 atmosphere 1015.0 30 < th dose dependent rect. 22 1
142 157.63 temperature 30.0 30 < th dose dependent rect. 22 1
144 157.65 precipitation 0.1 1440 < th dose independent rect. 23 1
145 157.65 precipitation 0.1 1440 < th dose dependent rect. 23 1
148 157.69 wind 9.0 720 < th dose independent rect. 11 16
149 157.69 wind 9.0 30 < th dose independent rect. 23 23
162 157.80 precipitation 0.1 10 < th dose independent rect. 23 23
163 157.80 precipitation 0.1 10 < th dose dependent rect. 23 23
207 158.32 wind 1.0 270 < th dose dependent rect. 14 1
212 158.49 wind 1.0 270 < th dose independent rect. 14 1
217 158.64 radiation 40.0 270 > th dose independent rect. 15 1
234 158.64 radiation 40.0 270 > th dose dependent rect. 15 1
251 158.79 atmosphere 1000.0 720 > th dose independent rect. 23 8
258 159.19 radiation 30.0 720 < th dose independent rect. 23 8
259 159.22 humidity 50.0 720 > th dose independent rect. 19 16
260 159.24 temperature 10.0 720 > th dose independent rect. 23 8
261 159.24 temperature 30.0 720 < th dose independent rect. 23 8
262 159.24 humidity 50.0 720 > th dose independent rect. 23 8
266 159.24 precipitation 0.1 720 < th dose independent rect. 11 8
267 159.24 temperature 10.0 720 > th dose independent rect. 7 16
268 159.24 precipitation 0.1 720 < th dose dependent rect. 11 8
271 159.29 wind 9.0 720 < th dose independent rect. 23 8
272 159.30 temperature 25.0 30 > th dose dependent rect. 14 21
273 159.35 temperature 10.0 720 > th dose independent rect. 11 8
274 159.35 atmosphere 1015.0 720 < th dose independent rect. 11 8
275 159.35 temperature 10.0 720 > th dose independent rect. 19 16
276 159.35 atmosphere 995.0 720 > th dose independent rect. 19 16
278 159.45 wind 1.0 720 > th dose independent rect. 11 8
279 159.53 precipitation 0.1 720 < th dose independent rect. 7 16
280 159.53 humidity 50.0 30 > th dose independent rect. 23 23
281 159.53 precipitation 0.1 720 < th dose dependent rect. 7 16
284 159.64 atmosphere 995.0 720 > th dose independent rect. 7 16
287 159.65 temperature 10.0 30 > th dose dependent rect. 23 23
288 159.67 atmosphere 995.0 720 > th dose independent rect. 11 8
293 159.82 precipitation 0.1 720 < th dose independent rect. 23 8
294 159.82 precipitation 0.1 720 < th dose dependent rect. 23 8
298 159.88 temperature 25.0 10 > th dose independent rect. 17 1
301 160.00 temperature 30.0 720 < th dose independent rect. 15 8
302 160.07 wind 9.0 720 < th dose independent rect. 19 16
310 160.36 temperature 30.0 720 < th dose independent rect. 3 8
313 160.61 humidity 80.0 14400 < th dose dependent rect. 1 8
315 160.63 temperature 25.0 30 > th dose dependent rect. 16 19
318 160.69 wind 1.0 720 > th dose independent rect. 13 8
319 160.69 atmosphere 1000.0 90 > th dose independent rect. 23 12
320 160.69 atmosphere 1005.0 30 > th dose dependent rect. 17 6
322 160.70 temperature 10.0 90 > th dose dependent rect. 23 12
327 160.76 atmosphere 1015.0 720 < th dose independent rect. 23 16
328 160.76 precipitation 0.1 720 < th dose independent rect. 19 16
329 160.76 precipitation 0.1 720 < th dose dependent rect. 19 16
331 160.83 atmosphere 1005.0 30 > th dose dependent rect. 17 2
336 160.96 temperature 25.0 30 > th dose dependent rect. 24 11
339 161.01 wind 1.0 720 > th dose independent rect. 11 2
340 161.02 temperature 30.0 10 < th dose independent rect. 23 23
341 161.05 temperature 10.0 720 > th dose dependent rect. 23 2
343 161.07 temperature 30.0 90 < th dose independent rect. 11 12
349 161.11 temperature 25.0 30 > th dose independent rect. 24 11
359 161.26 humidity 50.0 720 > th dose independent rect. 21 16
360 161.27 wind 9.0 720 < th dose independent rect. 1 8
361 161.28 temperature 10.0 720 > th dose independent rect. 13 8
362 161.28 radiation 40.0 720 < th dose independent rect. 1 8
363 161.28 temperature 10.0 720 > th dose independent rect. 21 16
364 161.28 atmosphere 995.0 720 > th dose independent rect. 21 16
366 161.30 temperature 10.0 720 > th dose independent rect. 1 8
367 161.30 humidity 50.0 720 > th dose independent rect. 1 8
368 161.30 atmosphere 995.0 720 > th dose independent rect. 1 8
369 161.30 temperature 10.0 720 > th dose independent rect. 9 16
379 161.36 humidity 80.0 14400 < th dose dependent rect. 7 1
380 161.36 atmosphere 1005.0 10 > th dose dependent rect. 2 2
389 161.48 wind 1.0 30 > th dose independent rect. 23 23
391 161.50 atmosphere 1015.0 720 < th dose independent rect. 15 8
392 161.51 temperature 30.0 720 < th dose independent rect. 1 8
393 161.53 atmosphere 1005.0 90 > th dose independent rect. 17 1
400 161.56 wind 5.0 14400 < th dose independent rect. 11 1
407 161.61 wind 7.0 14400 < th dose dependent rect. 11 1
418 161.67 radiation 40.0 10 < th dose independent rect. 23 23
420 161.68 temperature 25.0 30 > th dose dependent rect. 4 7
423 161.71 temperature 25.0 30 > th dose dependent rect. 6 5
425 161.72 atmosphere 995.0 720 > th dose independent rect. 13 22
429 161.74 humidity 90.0 30 < th dose independent rect. 17 1
434 161.77 atmosphere 995.0 720 > th dose independent rect. 1 22
436 161.78 atmosphere 1000.0 30 > th dose independent rect. 3 23
438 161.79 temperature 10.0 720 > th dose independent rect. 11 2
439 161.79 atmosphere 995.0 720 > th dose independent rect. 11 2
440 161.79 atmosphere 1015.0 720 < th dose independent rect. 11 2
442 161.79 temperature 10.0 720 > th dose independent rect. 13 22
447 161.80 wind 1.0 14400 > th dose dependent rect. 11 1
451 161.81 humidity 70.0 14400 > th dose independent rect. 8 1
452 161.81 precipitation 0.1 720 < th dose independent rect. 11 2
454 161.81 precipitation 0.1 720 < th dose dependent rect. 11 2
480 161.85 wind 9.0 720 < th dose independent rect. 21 16
482 161.86 atmosphere 1015.0 30 < th dose independent rect. 23 23
484 161.87 atmosphere 1015.0 90 < th dose independent rect. 11 12
488 161.89 wind 5.0 14400 > th dose independent rect. 11 1
489 161.89 atmosphere 995.0 720 > th dose independent rect. 13 8
491 161.89 radiation 40.0 720 < th dose dependent rect. 23 8
492 161.89 atmosphere 1005.0 30 > th dose dependent rect. 12 11
493 161.90 humidity 50.0 90 > th dose independent rect. 23 12
494 161.90 atmosphere 995.0 90 > th dose independent rect. 11 12
495 161.90 atmosphere 995.0 720 > th dose independent rect. 9 16
497 161.90 radiation 1.0 43200 < th dose dependent rect. 3 1
502 161.94 atmosphere 1015.0 720 < th dose independent rect. 1 8
503 161.94 radiation 40.0 90 > th dose independent rect. 14 21
506 161.95 wind 9.0 720 < th dose independent rect. 11 2
507 161.96 wind 9.0 90 < th dose independent rect. 23 12
509 161.97 temperature 10.0 90 > th dose independent rect. 11 12
510 161.97 temperature 10.0 90 > th dose independent rect. 23 12
513 161.97 temperature 25.0 720 > th dose dependent rect. 3 5
516 161.98 humidity 50.0 720 > th dose independent rect. 11 2
519 161.98 humidity 90.0 90 < th dose independent rect. 1 22
526 162.00 temperature 25.0 270 > th dose dependent rect. 14 1
530 162.01 temperature 15.0 30 > th dose dependent rect. 23 8
533 162.03 precipitation 0.1 720 < th dose independent rect. 13 8
535 162.03 precipitation 0.1 720 < th dose dependent rect. 13 8
539 162.05 temperature 30.0 90 < th dose independent rect. 23 12
540 162.05 precipitation 0.1 90 < th dose independent rect. 11 12
543 162.05 precipitation 0.1 90 < th dose dependent rect. 11 12
544 162.06 radiation 40.0 30 < th dose independent rect. 14 12
548 162.08 temperature 25.0 720 > th dose independent rect. 6 1
549 162.08 humidity 60.0 10 > th dose independent rect. 14 12
550 162.08 precipitation 0.1 10 < th dose independent rect. 2 12
553 162.08 precipitation 0.1 10 < th dose dependent rect. 2 12
554 162.09 humidity 70.0 14400 < th dose independent rect. 8 1
555 162.09 temperature 25.0 720 > th dose independent rect. 3 5
557 162.09 humidity 90.0 4320 < th dose dependent rect. 23 1
563 162.10 radiation 1.0 90 < th dose dependent rect. 1 23
565 162.11 temperature 25.0 720 > th dose dependent rect. 24 8
567 162.12 humidity 70.0 14400 > th dose independent rect. 24 9
573 162.13 humidity 70.0 14400 > th dose independent rect. 5 4
580 162.13 atmosphere 1000.0 10 > th dose independent rect. 2 12
581 162.13 precipitation 0.1 90 < th dose independent rect. 23 12
582 162.13 precipitation 0.1 720 < th dose independent rect. 1 22
584 162.13 precipitation 0.1 90 < th dose dependent rect. 23 12
585 162.13 precipitation 0.1 720 < th dose dependent rect. 1 22
586 162.14 radiation 20.0 720 > th dose independent rect. 15 1
593 162.15 precipitation 0.1 720 < th dose independent rect. 13 22
594 162.15 atmosphere 995.0 720 > th dose dependent rect. 23 2
597 162.15 precipitation 0.1 720 < th dose dependent rect. 13 22
605 162.17 atmosphere 995.0 90 > th dose dependent rect. 23 12
607 162.18 radiation 20.0 720 < th dose independent rect. 17 8
610 162.19 temperature 25.0 720 > th dose independent rect. 4 3
611 162.20 atmosphere 1000.0 10 > th dose independent rect. 14 12
620 162.22 temperature 10.0 720 > th dose independent rect. 17 8
623 162.22 temperature 10.0 720 > th dose independent rect. 1 16
624 162.22 temperature 25.0 720 > th dose dependent rect. 23 10
625 162.23 temperature 10.0 720 > th dose independent rect. 5 8
627 162.23 atmosphere 1015.0 720 < th dose independent rect. 5 8
628 162.23 wind 1.0 90 > th dose independent rect. 11 12
630 162.23 temperature 10.0 720 > th dose independent rect. 13 16
634 162.24 wind 9.0 720 < th dose independent rect. 6 17
649 162.26 wind 9.0 90 < th dose independent rect. 11 12
650 162.26 temperature 25.0 720 > th dose independent rect. 23 12
661 162.29 humidity 70.0 10 > th dose independent rect. 18 1
663 162.29 atmosphere 1000.0 30 > th dose independent rect. 11 23
678 162.31 temperature 25.0 30 > th dose dependent rect. 20 15
679 162.32 wind 1.0 720 > th dose independent rect. 8 7
680 162.32 radiation 1.0 720 > th dose independent rect. 8 7
692 162.33 humidity 90.0 4320 > th dose independent rect. 3 1
702 162.33 wind 9.0 720 < th dose independent rect. 11 7
703 162.33 wind 9.0 720 < th dose independent rect. 15 17
705 162.33 temperature 20.0 10 > th dose dependent rect. 17 1
725 162.35 temperature 20.0 30 > th dose independent rect. 23 8
733 162.36 radiation 1.0 90 > th dose independent rect. 16 1
741 162.37 temperature 30.0 30 < th dose independent rect. 17 2
747 162.37 temperature 10.0 720 > th dose dependent rect. 10 1
753 162.38 temperature 25.0 720 > th dose independent rect. 3 8
759 162.39 temperature 30.0 720 < th dose independent rect. 11 2
775 162.41 humidity 90.0 4320 < th dose independent rect. 4 1
779 162.41 temperature 25.0 10 > th dose independent rect. 24 18
799 162.44 wind 1.0 720 > th dose independent rect. 9 5
819 162.46 wind 7.0 720 < th dose independent rect. 2 1
821 162.46 temperature 15.0 720 > th dose independent rect. 8 7
822 162.46 atmosphere 995.0 720 > th dose independent rect. 8 7
824 162.46 humidity 90.0 30 < th dose independent rect. 7 16
825 162.46 radiation 10.0 270 > th dose independent rect. 13 20
826 162.46 wind 9.0 720 < th dose independent rect. 1 22
827 162.46 temperature 25.0 10 > th dose independent rect. 24 22
841 162.48 atmosphere 1000.0 720 > th dose independent rect. 2 1
842 162.48 temperature 10.0 10 > th dose independent rect. 2 12
844 162.48 temperature 10.0 10 > th dose independent rect. 14 12
845 162.48 humidity 50.0 90 > th dose independent rect. 11 12
847 162.48 atmosphere 1015.0 10 < th dose independent rect. 2 12
849 162.48 temperature 15.0 720 > th dose independent rect. 15 17
850 162.48 temperature 25.0 4320 > th dose dependent rect. 6 1
856 162.49 precipitation 0.1 720 < th dose independent rect. 14 1
857 162.49 temperature 25.0 4320 < th dose independent rect. 3 4
858 162.49 humidity 90.0 4320 < th dose independent rect. 3 5
864 162.49 precipitation 0.1 720 < th dose dependent rect. 14 1
869 162.50 radiation 10.0 30 < th dose independent rect. 23 9
880 162.51 wind 1.0 720 > th dose independent rect. 23 2
884 162.51 atmosphere 995.0 720 > th dose independent rect. 3 23
885 162.51 atmosphere 995.0 720 > th dose independent rect. 15 23
888 162.52 wind 3.0 10 > th dose independent rect. 17 1
889 162.52 atmosphere 995.0 720 > th dose independent rect. 14 1
893 162.52 wind 9.0 720 < th dose independent rect. 20 7
894 162.52 atmosphere 1015.0 30 < th dose independent rect. 22 12
897 162.52 radiation 40.0 1440 < th dose dependent rect. 18 2
899 162.53 radiation 20.0 90 > th dose independent rect. 10 1
907 162.53 atmosphere 1015.0 720 < th dose independent rect. 1 16
912 162.54 radiation 1.0 1440 > th dose independent rect. 11 1
917 162.54 wind 1.0 14400 < th dose dependent rect. 6 1
919 162.54 temperature 10.0 30 > th dose dependent rect. 3 23
920 162.55 temperature 25.0 4320 > th dose independent rect. 3 4
924 162.55 precipitation 0.1 30 < th dose independent rect. 14 12
926 162.55 humidity 70.0 4320 > th dose dependent rect. 3 6
928 162.55 precipitation 0.1 30 < th dose dependent rect. 14 12
929 162.55 temperature 25.0 270 > th dose dependent rect. 3 15
931 162.56 atmosphere 1015.0 720 < th dose independent rect. 22 1
932 162.56 temperature 15.0 720 > th dose independent rect. 20 7
940 162.56 temperature 15.0 720 > th dose independent rect. 3 17
960 162.58 wind 9.0 30 < th dose independent rect. 14 12
962 162.58 atmosphere 1015.0 720 < th dose independent rect. 3 17
963 162.58 temperature 30.0 1440 > th dose independent rect. 14 21
964 162.58 temperature 30.0 1440 < th dose independent rect. 14 21
966 162.58 radiation 10.0 30 < th dose independent rect. 23 23
967 162.58 precipitation 0.1 10 < th dose independent rect. 3 23
974 162.58 temperature 25.0 270 > th dose dependent rect. 24 18
975 162.58 precipitation 0.1 10 < th dose dependent rect. 3 23
977 162.59 temperature 10.0 720 > th dose independent rect. 2 1
978 162.59 temperature 30.0 720 < th dose independent rect. 2 1
979 162.59 humidity 50.0 720 > th dose independent rect. 2 1
983 162.59 radiation 1.0 720 < th dose independent rect. 2 1
990 162.59 atmosphere 1005.0 30 > th dose independent rect. 17 6
991 162.59 atmosphere 995.0 1440 > th dose independent rect. 3 12
994 162.59 temperature 10.0 720 > th dose independent rect. 3 23
995 162.59 radiation 1.0 720 < th dose dependent rect. 2 1